Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00499 ATGGGTTTCAACCTGAGCTCTTTCCTGATATCAATGCTAAAATCCAACCCGGGGGAAGTTCATGTCGATTCGACAGCCTTATTTGTGTTGCTTCTCTGTGCTTGTGTCATTATTGGTCATCTTCTCGAGAAGAATCGTTACATGAACGAGTCGATTACTGCCTTAGCGATTGGTCTTTTCACGGGGATCGTCATTTTATTTTCAACTGAAGGAAAAAGCTCTCATCTCTTGGTGTTTAATGAACAGCTATTCTTCATCTATCTTCTTCCACCGATCATTTTTAATGCGGGGTTTCAAGTGAAAAAGAAGCAATTCTTCAGAAATTTCTCGACAATTGTTTTGTTTGGTGCCGTTGGTAGCTTGATATCATTTTTCATCATATCGATAGGTTCAATGTATTTGTTCGAGAAATTGGATGTTGGCTTCTTAGAAGTGGCTGATTATTATGCACTTGGAGCAATCTTAACTGCAACCGATACGGTTTGTACCTTGCAGGTGCTTAATCAGGATGAGACACCTTTGCTGTACAGTCTAGTCTTTGGTGAAGGTGTAGTCAACGATGCGACTTCTGTGGTTCTTTTCCACGCAATCCGGAAATTCGACCTTTCCCACATTACTTCGATCAATGCCATTCAACTAGTTGGCAATTTCTTCTATTTGTTCTTCACTAGCACATTGCTGGGGATAGCTGTCGGTTTGCTCAGTGCGTACATCATTCGGAAACTTTACCTTGGCAGGCACTCTGCAGATCGGGAAATTGCTCTAATGATTCTAATGGCTTATCTTTCATATATGTTGGCCGAACTGTGCCTTTTAAGTGGTATTCTTACCGTCTTCTTTTGTGGGATCGTCATGTCACACTACACCTGGTATAACGTTACGAAGAGTTCAAAGGTCACTACAAAGCATGCTTTTGGGACACTATCATTTATTTCAGAGATTTTCATCTTCCTCTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAAATTCGTACTCAAGAGCCCTGGGACGTCAGTTACTGTGAGTTTAATACTGCTCGGTCTGGTTCTCATTGGAAGAGCAGCTTTTGTCTTCCCTCTCTCTTTCGTAGCCAACTTGAGTCGGAAGCATAAGAACGACAAAATCGGGTTCAGGAAACAGATTACAATTTGGTGGGCTGGACTGATGAGAGGCGCTGTATCAGTGGCACTTGCTTATGATCATTTTACAAGATCAGGACAAACCCAACTTCGAGGGAACGCAATCATGATCACGAGCACGATAAGCATTGTTCTCTTTACAAATATGGTATGTGGATTATTGACTAAGCCTCTTATAAGGCACTTGCTTCCATCAAGTAGACTGAGAGAAGACGCCTCTGCACTCTCGGACTCGCCTGCACTCTCTACACCACTTCTATCGTACGGGCCCGGTCAAGAAGATCAAGGACTCGATACGAGTGGCGACTCAGGTCTTGGACCACAACCGAGGAGCTTGTCACGCTCCATTCATCGCTACTGGCGAATGCTAGACGATGCATATATGCGGCCCGTGTTTGGGGGAAGAGGTTTTGCGTCGACCATTCCCACTTCGATATTCGATAAGTTTATTCGATGA 1602 43.45 MGFNLSSFLISMLKSNPGEVHVDSTALFVLLLCACVIIGHLLEKNRYMNESITALAIGLFTGIVILFSTEGKSSHLLVFNEQLFFIYLLPPIIFNAGFQVKKKQFFRNFSTIVLFGAVGSLISFFIISIGSMYLFEKLDVGFLEVADYYALGAILTATDTVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFHAIRKFDLSHITSINAIQLVGNFFYLFFTSTLLGIAVGLLSAYIIRKLYLGRHSADREIALMILMAYLSYMLAELCLLSGILTVFFCGIVMSHYTWYNVTKSSKVTTKHAFGTLSFISEIFIFLYVGMDALDIDKWKFVLKSPGTSVTVSLILLGLVLIGRAAFVFPLSFVANLSRKHKNDKIGFRKQITIWWAGLMRGAVSVALAYDHFTRSGQTQLRGNAIMITSTISIVLFTNMVCGLLTKPLIRHLLPSSRLREDASALSDSPALSTPLLSYGPGQEDQGLDTSGDSGLGPQPRSLSRSIHRYWRMLDDAYMRPVFGGRGFASTIPTSIFDKFIR 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16214655 16220243 - Bpe020001.1 Bpe06g00499 105437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00499 533 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bpe06g00499 533 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 444 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe06g00499 533 Gene3D - 144 195 - -
Bpe06g00499 533 PANTHER SODIUM/HYDROGEN EXCHANGER 11 528 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bpe06g00499 533 PRINTS Na+/H+ exchanger signature 152 162 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe06g00499 533 PRINTS Na+/H+ exchanger signature 83 94 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe06g00499 533 PRINTS Na+/H+ exchanger signature 97 111 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe06g00499 533 PRINTS Na+/H+ exchanger signature 112 120 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe06g00499 533 PANTHER SODIUM/HYDROGEN EXCHANGER 11 528 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00024 Bpe-Chr3:403680 Bpe06g00499 Bpe-Chr6:16214655 2.20E-10 dispersed
Bpe05g00261 Bpe-Chr5:15529673 Bpe06g00499 Bpe-Chr6:16214655 0 dispersed
Bpe05g00855 Bpe-Chr5:21739042 Bpe06g00499 Bpe-Chr6:16214655 0 dispersed
Bpe06g00499 Bpe-Chr6:16214655 Bpe11g00564 Bpe-Chr11:4330297 0 dispersed
Bpe06g00499 Bpe-Chr6:16214655 Bpe02g01889 Bpe-Chr2:20861052 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00499 - K14724 csv:101206431 713.761