Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00510 ATGAAGAAAAGAGTAAAATATGAGGAAGAGGACGCTACATATAGTAAGAAGCTACAGTCCAATGGAAGGAACAGCGACGTGTCTACGTTTTACAGGGCTCCAGAGGATCAAGCTTCGCACATGGAGAAAGGTCACTCGGACAGACAAGGATTTAAGTACGATTTTGCAGGTGGAAGCAGCGCTTCAAGCGAAGATGGTGCCGTTAAAGATCAAGATCGGTTGCTTCCTATCGCTAATGTCGGCAGGATCATGAAACAGATTTTGCCTCACTCTGCCAAAGTCTCTAAAGAAGCTAAGGAAACTATGCAAGAATGTGTGTCTGAGTTCATAAGCTTCGTCACCGGAGAAGCCTCCGATAAGTCCCGGAATGAGAAGAGGAAGACGCTCAACGGCGACGATGTCTGCTCTGCTATAGAGCTTCTGGGATTTGACGATTATGCTCAGCCATTGAAGAGGTATTTGCTCAAGTATAGAGAGGTTGAGGAGGAGAGAGCTAAAAGTAAGATTGAAAACGAAGAAGAAGAAGAAGATTATAAGAACTAG 543 44.57 MKKRVKYEEEDATYSKKLQSNGRNSDVSTFYRAPEDQASHMEKGHSDRQGFKYDFAGGSSASSEDGAVKDQDRLLPIANVGRIMKQILPHSAKVSKEAKETMQECVSEFISFVTGEASDKSRNEKRKTLNGDDVCSAIELLGFDDYAQPLKRYLLKYREVEEERAKSKIENEEEEEDYKN 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16289772 16290314 + Bpe020011.1 Bpe06g00510 105448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00510 180 MobiDBLite consensus disorder prediction 161 180 - -
Bpe06g00510 180 MobiDBLite consensus disorder prediction 1 68 - -
Bpe06g00510 180 Gene3D Histone, subunit A 62 180 IPR009072 GO:0046982
Bpe06g00510 180 SUPERFAMILY Histone-fold 71 170 IPR009072 GO:0046982
Bpe06g00510 180 MobiDBLite consensus disorder prediction 17 32 - -
Bpe06g00510 180 MobiDBLite consensus disorder prediction 1 16 - -
Bpe06g00510 180 Coils Coil 150 177 - -
Bpe06g00510 180 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 53 175 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bpe06g00510 180 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 74 138 IPR003958 -
Bpe06g00510 180 MobiDBLite consensus disorder prediction 36 50 - -
Bpe06g00510 180 PRINTS CCAAT-binding transcription factor subunit A signature 121 139 - -
Bpe06g00510 180 PRINTS CCAAT-binding transcription factor subunit A signature 140 158 - -
Bpe06g00510 180 PRINTS CCAAT-binding transcription factor subunit A signature 102 120 - -
Bpe06g00510 180 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 53 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00510 Bpe-Chr6:16289772 Bpe15g00441 Bpe-Chr15:15878632 1.82E-45 dispersed
Bpe09g00591 Bpe-Chr9:14658037 Bpe06g00510 Bpe-Chr6:16289772 2.00E-39 dispersed
Bpe06g00510 Bpe-Chr6:16289772 Bpe11g00587 Bpe-Chr11:4466290 1.53E-44 transposed
Bpe06g00510 Bpe-Chr6:16289772 Bpe14g00737 Bpe-Chr14:5698458 1.06E-44 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21574 PF00808 CBFD_NFYB_HMF 5.60E-24 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00510 K08065 - qsu:112003935 180.259