Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00511 ATGAGAAGCAAGAACGGAACCTTTAGGAGAAGGAGCAAGAAAATGGAGGCGGCCTTAAATAGACAAATGGAGGTTCAGATCGGGAAAGTTACTCTGGCTCCTTTCCAGCTTCCTCGATCGTGTTTCGCCTCTTCATCGTCATCCGCTTCTTCTTGTCTAGATCATTTGGAGTCAGAAATTTTAGCACCGGAAACCTCTCGTTTTTTCCCTTCCTCTTTTCCTTGTGGAGGTGCTGATTCCGATTCCATTGTTGAGGATAAGGATTGCATTCTCAGCCAAGACTTCTTTTGCACGCCAGACTATATCACTCCGGATAATCAACACTTGTTCAATAACTTGGATTTGAATAAGGATGATATACCTTGCCCCAAATCTCCGGAGAAGCTTAATACTGTGAAAAGTAAGAGACGTCGACAAGGTTCTGTCCTAGTAAATCCTCTGAGTCCGACCTTATATGGTCATCAACAAGTAGAGGAACTTGGCAACGAAACTGACGGTGGAGATGAATTGAAATCAGAAAAAGTAGTAACAGGAGAAAAGAAGGTTCAAAACTATGTCTCTCAATCTGCAGTTGCTTTACGGTGTAGAATAATGCCGCCTCCATGTCTGAAGAACCCTTATTTGAGAGATGCTTCAGAAATAGGTGTAGATCCTTTTGGTAATCAAAGAACAAAATGTGCAGGTTTCTTTCCTTCACTGGTAGGTGGAGACAGCCTTTCCCGTTATTACACTGACTTTCAAGAGATTGAGCATATTGGTACTGGGAACTTCAGCCGTGTTTTTAAAGCGTTGAAGAGAATTGATGGTTGCTTGTATGCCGTCAAACATAATGCGAGGAAGTTGCATCAAGAAATGGAAAGGTCACTTTCGATTGTTGATGTGTCTGTTGTATGTTTGAGATTTCATGAAAATATCGTTGGATACTATTCTTCATGGTTCGAGAATGAGCAACTTTACATTCAGATGGAACTTTGTGATTGCAGCTTATCCATCAACAAAGCTTCTCAATCATTCACCGAAGGAGAAGTTTTAAAAGTGTTGCATCAGATTGCAAAGGCCTTGCAGTTCATACATGAAAAGGGAATAGCTCATTTGGATGTAAAACCTGACAATATTTACGTGAAAAATGGTATTTATAAGCTTGGGGATTTTGGATGTGCAACTCTTCTGGACAAGACCCTGCCAATCGAAGAAGGCGATGCACGATATATGCCCCACGAAATCCTAAATGATAGATATGATTATCTTGACAAGGTTGACATTTTCTCCCTGGGAGCTGCAATCTTTGAGCTTATAAGAGGATCGGCTTTACCAGAATCAGGGCCTCATTTAATGAATCTTAAGGAAGGGAAACTGCCACTTCTTCCTGGTCACTCATTGCAGTTTCAAAACTTACTCAAGGTAATGCTGGATCTCGATCCGGTGCGGCGACCGTCAGCTAAGAACATTGTAGAGAATCCGATATTTGACAAACTTGGTGCAAGTGGAACAAGAAGGTAG 1500 41.53 MRSKNGTFRRRSKKMEAALNRQMEVQIGKVTLAPFQLPRSCFASSSSSASSCLDHLESEILAPETSRFFPSSFPCGGADSDSIVEDKDCILSQDFFCTPDYITPDNQHLFNNLDLNKDDIPCPKSPEKLNTVKSKRRRQGSVLVNPLSPTLYGHQQVEELGNETDGGDELKSEKVVTGEKKVQNYVSQSAVALRCRIMPPPCLKNPYLRDASEIGVDPFGNQRTKCAGFFPSLVGGDSLSRYYTDFQEIEHIGTGNFSRVFKALKRIDGCLYAVKHNARKLHQEMERSLSIVDVSVVCLRFHENIVGYYSSWFENEQLYIQMELCDCSLSINKASQSFTEGEVLKVLHQIAKALQFIHEKGIAHLDVKPDNIYVKNGIYKLGDFGCATLLDKTLPIEEGDARYMPHEILNDRYDYLDKVDIFSLGAAIFELIRGSALPESGPHLMNLKEGKLPLLPGHSLQFQNLLKVMLDLDPVRRPSAKNIVENPIFDKLGASGTRR 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16298357 16302121 - Bpe020012.1 Bpe06g00511 105449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00511 499 SUPERFAMILY Protein kinase-like (PK-like) 238 492 IPR011009 -
Bpe06g00511 499 ProSitePatterns Protein kinases ATP-binding region signature. 252 275 IPR017441 GO:0005524
Bpe06g00511 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 362 374 IPR008271 GO:0004672|GO:0006468
Bpe06g00511 499 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 416 492 - -
Bpe06g00511 499 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 83 403 - -
Bpe06g00511 499 PANTHER BNAA08G27310D PROTEIN 416 492 - -
Bpe06g00511 499 PANTHER BNAA08G27310D PROTEIN 83 403 - -
Bpe06g00511 499 Gene3D Transferase(Phosphotransferase) domain 1 324 493 - -
Bpe06g00511 499 Pfam Protein kinase domain 246 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00511 499 ProSiteProfiles Protein kinase domain profile. 246 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00511 499 SMART serkin_6 246 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00511 499 Gene3D Phosphorylase Kinase; domain 1 236 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00979 Bpe-Chr5:22619832 Bpe06g00511 Bpe-Chr6:16298357 7.70E-21 dispersed
Bpe06g00511 Bpe-Chr6:16298357 Bpe14g01152 Bpe-Chr14:8578504 6.60E-19 dispersed
Bpe06g00511 Bpe-Chr6:16298357 Bpe02g01619 Bpe-Chr2:19064137 7.93E-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63393 PF00069 Pkinase 2.70E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00511 K06632 - csv:101213255 649.047