Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00535 ATGGCTTCTAAATCCCACCTCCTTTTTGTGGCGGCGACTCCATTTTTATTTCTTCTTCTAGTTTCTGCAGATGTTCCTCCGACTACTCCGGTGACTACTGGTTCCATTTGCGGGTCGACCAAAGATCCTTCCTTTTGCAAAGATGTGCTCCCCAATGGAACCGGAAATGTCTACGATTTCTGCCGGTTTTCGGTCCGGAAGTCACTGTCGCAGTCGAGAAAGTTCCTGAGCTTAGTAAATAAGTATCTACGTCGACGGTCTTCCTTAACTTTGACCGCCATTAGAGCTCTCGAAGATTGCCGGTTTCTCGCAGAGTTAAACATGGATTATTTATTGACCTCATTCCGAACTGTGAACTCTTCCGGGGTAACTCTTCCGGAAATGCAAGCTGATTACTTGCAGACTTTGCTCAGCGGATGTTTGACTAATCAACAGACTTGTTTAGAAGGTTTAAAATCGACTGCTTCGGCTTGGAGTTTGAGAAATGGACTCGCCCTCCCTCTTGCTAATGATACTAAGCTCTACAGTGTTTCGTTAGCTCTGTTTACCAGAGGGTGGGTGTCGAAGAAGAAGAAGAAGAAAAGCTCGTCTTCGTGGATCCCGTCCAGGAAGCATCTGGGGTTCAGAAAGGGGCACCTGCCGATGAAAATGTCGGCCCGAACTCAGGCGATTTACGAGAAATTCACCCGGAGGAACCTGCTGCAGACGGAGGGCGACGAAGACGATGATTCGGTTACACTTGCTGATATTGTGGTGGTTAGCCAAGATGGGAGTGGAAACTTCACCACCATTAACGACGCCATTGCTGCAGCTCCGAATAACTCGGTCATCGACGACGGGTATTTTTTGATATACGTCACAACCGGCGTTTACGAAGAGTACGTTTCCATTGCGAAAAATAAACGGTATTTGATGATTGTCGGAGATGGTATAAATCAGACGATTATCACCGGTAATAGAAGCTTCGTCGATGGGTGGACTACTTTCAACTCTGCAACTTTCGCTGTAGTCGGGCCAGGATTCATCGGAATGGACATAACCATCAGAAACACTGCCGGAGCCATAAAACACCAGGCCGTCGCGCTCCGAAACGGAGCCGACTTATCAGTCTTCTACAGCTGCAGCTTCGAAGGCTACCAAGACACTCTCTACGCCCACTCCCTACGACAATTCTACAGAGAATGCGATGTCTACGGCACCGTCGACTTCATATTCGGCAACGCCGCCGTCGTCCTCCAAAACTGCAACATCTACCCTCGGCTCCCACTATCCAACCAATTCAACGCCATTACAGCTCAAGGAAGAACAGACCCGAACCAAAACACCGGGACTTCGATCCACAACTGCACAATCGTAGCCGCCGACGATCTTGCTTCCAGCAACAGCAGCATTCAGACCTACCTGGGCAGGCCGTGGAAGGAGTATTCGAGAACGGTGTTTATGCAGAGTTATATGGGGAGTTTGATTAATCCGGCGGGTTGGAGAGCTTGGGACGGCGACTTCGCTCTGAAAACGTTGTACTACGCCGAGTTTAACAATTCCGGACCGGGATCTAATACCACCGGAAGAGTCAACTGGGATGGATACCACGTGATTAATTCCACCGAGGCTGCTAACTTTACGGTTTCTACGTTCTTGCTGGGAGATGATTGGTTGCCCCAAATTGGAATCCCTTACTTTGGAGGCTTGATAAGCTAA 1698 48.88 MASKSHLLFVAATPFLFLLLVSADVPPTTPVTTGSICGSTKDPSFCKDVLPNGTGNVYDFCRFSVRKSLSQSRKFLSLVNKYLRRRSSLTLTAIRALEDCRFLAELNMDYLLTSFRTVNSSGVTLPEMQADYLQTLLSGCLTNQQTCLEGLKSTASAWSLRNGLALPLANDTKLYSVSLALFTRGWVSKKKKKKSSSSWIPSRKHLGFRKGHLPMKMSARTQAIYEKFTRRNLLQTEGDEDDDSVTLADIVVVSQDGSGNFTTINDAIAAAPNNSVIDDGYFLIYVTTGVYEEYVSIAKNKRYLMIVGDGINQTIITGNRSFVDGWTTFNSATFAVVGPGFIGMDITIRNTAGAIKHQAVALRNGADLSVFYSCSFEGYQDTLYAHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNIYPRLPLSNQFNAITAQGRTDPNQNTGTSIHNCTIVAADDLASSNSSIQTYLGRPWKEYSRTVFMQSYMGSLINPAGWRAWDGDFALKTLYYAEFNNSGPGSNTTGRVNWDGYHVINSTEAANFTVSTFLLGDDWLPQIGIPYFGGLIS 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16428946 16430793 - Bpe020035.1 Bpe06g00535 105473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00535 565 SUPERFAMILY Pectin lyase-like 246 562 IPR011050 -
Bpe06g00535 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 184 IPR035513 -
Bpe06g00535 565 SMART PMEI_2 26 181 IPR006501 GO:0004857
Bpe06g00535 565 CDD PMEI-like_3 35 186 - -
Bpe06g00535 565 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 26 562 - -
Bpe06g00535 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 184 IPR035513 -
Bpe06g00535 565 Gene3D - 244 563 IPR012334 -
Bpe06g00535 565 Pfam Plant invertase/pectin methylesterase inhibitor 35 181 IPR006501 GO:0004857
Bpe06g00535 565 Pfam Pectinesterase 251 549 IPR000070 GO:0030599|GO:0042545
Bpe06g00535 565 PANTHER PECTINESTERASE 26 562 - -
Bpe06g00535 565 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00535 Bpe-Chr6:16428946 Bpe14g00892 Bpe-Chr14:6662463 3.54E-140 dispersed
Bpe15g00659 Bpe-Chr15:17311899 Bpe06g00535 Bpe-Chr6:16428946 6.18E-40 dispersed
Bpe06g00535 Bpe-Chr6:16428946 Bpe09g00049 Bpe-Chr9:328544 1.58E-10 transposed
Bpe06g00535 Bpe-Chr6:16428946 Bpe02g02161 Bpe-Chr2:22894363 1.11E-129 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00535 K01051 - cit:102613865 820.076