Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00547 ATGCGGCGGTTTGACGATCAGAGTCTGAGAGTGATTTCGGTGCTCGGTCGTGGAGCCAAGGGCGTGGTGTTTCTTGCTCGGGATGAAGAGGACGGTGAGTGGCTTGCTTTGAAGATCATTTCTAGGGCTTTGATTGAGAGGAAGGGGAAATCTCTCAATGGCGATGGAGCGGAGGAGTACAGGAGAGTCTGCTTTGAACGAGACGTTCTCCGGCGGTTCCAGCATCCTCTTTTGCCAAGATTGCGTGGAGTTTTCGAGACGGAGAATGTTGTGGGTTATGCCATCGATTATTGCCCTGGCCGCAATCTTAACTGCCTGAGAAAGAAACAGACGGAGAAGATGTTCTCCGATGATGTCATCAGGTTTTATGCGGCAGAATTAGTAATGGCATTGGAGTATGTTCACAGTTTAGGAATCGTATACAGAGATCTGAAGCCAGAAAACATTATGATTCAAGATACTGGCCATATAATGCTCGTAGATTTCGACCTCTCCACAAGTCTCTCTCCCAAGACTCCCAAGCCTCCTCCGAGGCCAAAAGTTTTCTCCACTTCTCAATCCGTCAAGAAGAAGCGATTCTTGTCCGTCAGTCGGTTTTGCAACTCCGGCATTTCACCGGAAGGTTCAGAAACTCCTCCTCCTCCTCCTCCTCCTCCACTCCGCCATTGTAAACTCAGCGATGAGTCTACCGGGAACAAATCAAACTCCACCGACAAATCAAACTCCACCGAAAAATCCAACTCGACGGACAAATCGAACTCCTTTGTCGGAACGGAGGAGTATGTGGCTCCAGAAATCGTTTCCGGGAACGGCCACAATTTCGCTGTAGACTGGTGGTCCATGGGAGTCGTTCTGTACGAGATGCTTTATGGAACGACGCCGTTCAGAGGATCCAATAGGAAGGAGACGTTCTACAGGATTTTGACCAAGTCGCCGGAGCTGACCGGCGAAGCGACGCCGTTGAGAGACCTAATCAGAAAATTACTGGATAAAGACCCAAACGACAGAATTGACCTTCTCGAAATCAAGGACCACGATTTTTTCAACGGGGTAGACTGGAACTCCGTATATCAAATCGCACGGCCACCATTCATCCCTGAAGACGAGATCAGTAGCTTTGATGATGTGAACAAAAAAGTAGACGTGGAGGTTATTGTCCAAGAAATATTCGGCCACAATGAGGCAGGGGAAGTTGGCTGTAATGATGAAAAGCAACGTGACAGACCATTGGTGCCAGAGGATCCACATCCAAATAGCCATAATCACAATCATAATCGTGTTCATGGTGATCAACCAGAAGCTCATACATTTTATGATTTCTAA 1323 47.85 MRRFDDQSLRVISVLGRGAKGVVFLARDEEDGEWLALKIISRALIERKGKSLNGDGAEEYRRVCFERDVLRRFQHPLLPRLRGVFETENVVGYAIDYCPGRNLNCLRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENIMIQDTGHIMLVDFDLSTSLSPKTPKPPPRPKVFSTSQSVKKKRFLSVSRFCNSGISPEGSETPPPPPPPPLRHCKLSDESTGNKSNSTDKSNSTEKSNSTDKSNSFVGTEEYVAPEIVSGNGHNFAVDWWSMGVVLYEMLYGTTPFRGSNRKETFYRILTKSPELTGEATPLRDLIRKLLDKDPNDRIDLLEIKDHDFFNGVDWNSVYQIARPPFIPEDEISSFDDVNKKVDVEVIVQEIFGHNEAGEVGCNDEKQRDRPLVPEDPHPNSHNHNHNRVHGDQPEAHTFYDF 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16513874 16515285 - Bpe020048.1 Bpe06g00547 105485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00547 440 MobiDBLite consensus disorder prediction 204 254 - -
Bpe06g00547 440 ProSiteProfiles Protein kinase domain profile. 9 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00547 440 Gene3D Transferase(Phosphotransferase) domain 1 102 170 - -
Bpe06g00547 440 Gene3D Transferase(Phosphotransferase) domain 1 245 367 - -
Bpe06g00547 440 SUPERFAMILY Protein kinase-like (PK-like) 10 383 IPR011009 -
Bpe06g00547 440 MobiDBLite consensus disorder prediction 208 222 - -
Bpe06g00547 440 Gene3D Phosphorylase Kinase; domain 1 9 101 - -
Bpe06g00547 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Bpe06g00547 440 MobiDBLite consensus disorder prediction 396 440 - -
Bpe06g00547 440 MobiDBLite consensus disorder prediction 168 187 - -
Bpe06g00547 440 MobiDBLite consensus disorder prediction 397 440 - -
Bpe06g00547 440 PANTHER RHO-ASSOCIATED PROTEIN KINASE 1/2-RELATED 5 395 - -
Bpe06g00547 440 PANTHER FLIPPASE KINASE 1-RELATED 5 395 - -
Bpe06g00547 440 SMART serkin_6 9 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00547 440 ProSiteProfiles AGC-kinase C-terminal domain profile. 349 440 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe06g00547 440 MobiDBLite consensus disorder prediction 229 254 - -
Bpe06g00547 440 Pfam Protein kinase domain 11 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00547 440 Pfam Protein kinase domain 246 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00305 Bpe-Chr1:1878661 Bpe06g00547 Bpe-Chr6:16513874 1.29E-96 dispersed
Bpe06g00547 Bpe-Chr6:16513874 Bpe11g01016 Bpe-Chr11:7560216 3.34E-70 dispersed
Bpe06g00547 Bpe-Chr6:16513874 Bpe02g01037 Bpe-Chr2:11063600 1.57E-71 transposed
Bpe06g00547 Bpe-Chr6:16513874 Bpe08g00199 Bpe-Chr8:1117847 4.43E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63394 PF00069 Pkinase 1.10E-31 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00547 K20714 - zju:107426805 469.544