Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00550 ATGGATTCTGGACGTTGGTATCATAAGCTTCAACCACGGGATAAGTTGAGGACTTTATCAAAGAGGAAGGATGTTGAAGGTGGAAGCAAGGAAGACTCGAATCTGTCAGCTGATGAAGAAGCTCTTTCCAATGCTACAAAACAGAAGGCTGAAGCAGCGAAGCAGTTTATTGAGAATCACTACAAGGAGCAAATGAAGAACCTGCAGGACAGGAAGGAGAGACGAAATAACTTGGAAAAGAAGTTGGCTGATGCTGATGTTTCTGAGGAAGATCAGAACAATCTCCTCAAATTCTTGGAGAAGAAGGAAACAGAATATATGAGGCTTCAAAGACAAAAAATGGGTGTGGATGATTTTGAATTAATGTCAATGATTGGAAAAGGCGCTTTTGGAGAGGTTCGAGTTTGTAGGGAGAAGACTACAAGTCATGTATATGCTATGAAAAAACTAAAGAAATCAGAAATGCTTCGAAGGGGCCAGGTAGAGCACGTGAAAGCTGAGAGAAATTTGCTTGCTGAGGTGGAGAGCAACTGCATAGTCAAACTTTACTCTTCTTTTCAAGACGATGACTATCTTTATCTTATCATGGAATATCTACCTGGTGGTGATATGATGACTTTACTTATGAGGAAAGATACTTTGACTGAGGAGGAAGCCAGATTTTATATTGCAGAAACAGTTTTAGCTATCGAATCCATCCATAAACACAATTATGTTCATAGGGATATCAAGCCTGACAACTTGCTGCTTGATAGATATGGACACTTAAGACTGTCAGATTTTGGGTTATGTAAACCCTTAGATTGCAGCACAATCCAAGAACACGATTTTTCAGTAGGTAACAGTTCCAATGGGTCAGGACAGAATGATGATCGCTCTGTGGCTCCTAACCGTACACAGCAAGAGCAACTGCAACATTGGCAAAGGAATCGAAGAATGCTTGCTTATTCCACTGTTGGCACACCAGACTATATAGCTCCTGAGGTTCTGTTGAAGAAAGGTTATGGATTGGAATGCGATTGGTGGTCCCTGGGTGCTATAATGTATGAAATGCTAATTGGCTATCCACCTTTTTATTCTGATGATCCCATGTCAACATGTAGGAAGATAGTTAACTGGAGGACTCATTTGAAGTTTCCTGAAGAAGCAAAGTTATCTCAAGAGGCAAAAGATCTGATTAGTAAGCTCCTGTGTAACGTTGGCCAGAGACTAGGGTCAAAAGGCGCATTTGAGATTGAGGCTCATCCATGGTTTCAAGGTATTGAATGGCATAAGCTATATCAAATAGAAGCTGCTTTCATTCCTGAGGTAAATGACGAGTTGGATACCCAAAATTTTGAGAAGTTTGAAGAGCTTGACAACCAGAATAACCCGTCCTCAAAAACTGGTCCTTGGAGAAGGATGCTCTCATCCAAGGATATTAACTTCGTTGGCTATACATACAAGAATTTCGAGATAGTAAATGACTATCAAATGCCTGGGACGGTTGAGCTGAAGAAGAAAAACACCAAATCGAGAAGACCTTCCATCAAGTCACTTTTCGATGGAGAGTCCGAAACATCAGAAACGATGGAGAAATTGGCCATCTCAGCAAATAATCATCATATGCAAGGCAGCTTTTTAAACCTATCGTCTCCAGAACAAGAAGTATCTCAAAAATCTTTTTTTTTGAGGCTTTACACGATGAGTTTGAATCAAGCTCAGAGGCACAAGGACTGA 1719 40.55 MDSGRWYHKLQPRDKLRTLSKRKDVEGGSKEDSNLSADEEALSNATKQKAEAAKQFIENHYKEQMKNLQDRKERRNNLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRQKMGVDDFELMSMIGKGAFGEVRVCREKTTSHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVESNCIVKLYSSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYIAETVLAIESIHKHNYVHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSTIQEHDFSVGNSSNGSGQNDDRSVAPNRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLIGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSQEAKDLISKLLCNVGQRLGSKGAFEIEAHPWFQGIEWHKLYQIEAAFIPEVNDELDTQNFEKFEELDNQNNPSSKTGPWRRMLSSKDINFVGYTYKNFEIVNDYQMPGTVELKKKNTKSRRPSIKSLFDGESETSETMEKLAISANNHHMQGSFLNLSSPEQEVSQKSFFLRLYTMSLNQAQRHKD 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16532541 16539012 + Bpe020051.2 Bpe06g00550 105488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00550 572 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe06g00550 572 MobiDBLite consensus disorder prediction 1 37 - -
Bpe06g00550 572 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Bpe06g00550 572 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bpe06g00550 572 Gene3D Phosphorylase Kinase; domain 1 117 202 - -
Bpe06g00550 572 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Bpe06g00550 572 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe06g00550 572 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00550 572 MobiDBLite consensus disorder prediction 278 303 - -
Bpe06g00550 572 Coils Coil 35 88 - -
Bpe06g00550 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Bpe06g00550 572 Gene3D Transferase(Phosphotransferase) domain 1 203 269 - -
Bpe06g00550 572 Gene3D Transferase(Phosphotransferase) domain 1 317 436 - -
Bpe06g00550 572 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 521 - -
Bpe06g00550 572 MobiDBLite consensus disorder prediction 1 51 - -
Bpe06g00550 572 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00550 572 CDD STKc_NDR_like 117 482 - -
Bpe06g00550 572 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 24 521 - -
Bpe06g00550 572 Pfam Protein kinase domain 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00550 572 SUPERFAMILY Protein kinase-like (PK-like) 93 471 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00857 Bpe-Chr5:21780310 Bpe06g00550 Bpe-Chr6:16532541 0 dispersed
Bpe06g00550 Bpe-Chr6:16532541 Bpe08g00532 Bpe-Chr8:3615119 0 dispersed
Bpe12g00392 Bpe-Chr12:9344961 Bpe06g00550 Bpe-Chr6:16532541 7.17E-70 transposed
Bpe05g00048 Bpe-Chr5:873065 Bpe06g00550 Bpe-Chr6:16532541 2.86E-96 transposed
Bpe10g00480 Bpe-Chr10:12055396 Bpe06g00550 Bpe-Chr6:16532541 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63395 PF00069 Pkinase 3.20E-64 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00550 K08790 - jre:108982626 921.383