Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00551 ATGAAAGTGGGATACGAAGTAGTTCATGGGTCTGTGGGGACAATCCAACCCCATGAACAATGGGATTTCTCTAATTGCCTCAGAGTTGTCCAACCTCACACTTCCAGTCTCCTTACAAAGCCTCTAGGAGAAAACCAGAGTTCAAACATGGAGTCTGACGAGCTTTCGGAGTGGGTGGAACATATTGCCAACCAGCTCATTGATGATTCGCCGGATTCCAATGGATGCCGTACCTTGCACTTCGATTCGTCAATGGAGTCCTCCCAATTAGGCGAGTTAGTGGCGAAGAAAACTGGCTCGAAACCTTGTTTCGATGACAGTAGCGGGATGCATCAATTGAACGTCGGTCTTCGATATCGCGAAGAATTAAGCAAGGTAGATGAGTACGGATTAACTCTGATTAGTCTCTTGTTCGAGTGCGCCGTAGCGATCTCTGTCGATAATCTGGCGGATGCGCATCGAATGCTGCTTGCACTAACGCAAATGGCAACTCCGTATGGATCGTCGTGCGCAGAGCGAATCGTTGCGTATTTTGCCAAGGCCATGGCTAGTAGAGTCATAAACTCCTGGTTAGGTATGTGTTTTCCTCTGATAAACCATAAGAGCATCCATGGCGCTCTACAGGTCTTCAACGACGTCTCTCCCTTCATCAAATTCGCGCATTTCACTTCCAACCAAGCAATTTTTGAGGCCTTTCACGGCCGCGATCGAGTTCACATCGTCGATCTCGACATCATGGAAGGTCTACAATGGCCGGCTCTATTTCACATGCTCGCCTCTCGTGTCGAAGGCCCGCCTAAAGTAAGAATGACCGCCATCGGAACGTCAATGGAACTTCTAGTCGAAACCGGAACGAAACTCTCGAATTTCGCTCGGAAATTGGGAATATCTTTCGAGTTCTACCAGATCGCCAGAAAATTTGGGGAAATCGAAGCTTCCATGGTGCAATTGAGACGGGGAGAAACACTAGCTGTGCACTGGCTACAACACTCGCTCTACGATTTCAACGGTTCCGATTGGAAAACACTGAGTCTAATCCAAACATTCAAGCCCAAAATCTTCACCCTAGTAGAACAAGACATCATTCGCGGCGGTTCATTTCTCGATCGTTTCGTCGGTTCTCTGCACTATTATTCCGCCATTTTCGACTCCCTCGGAGCTTACCTTCCGACGGACGATCCAAACCGGCACCACGTCGAGAGCTCCCTCCTGTACAGAGAAATCAACAACATATTGGCGATCGGAGGGCCGTCGCGGAGCGGAGAGGAAAAGTTTGAACAGTGGAGGAGCGAATTGAGGAAGAGTTTAACGGGAGTTCCGGCTAGCGGAAACTCAGTTTGTCAAACGCAGTTGATGTTGAGCATGTTTTCTCCAGCTCAAGGTTACACGCTCGTCAATGGGGATTTAGGGACGCTCAGTCTTGGTTGGAAGGGCACCAATCTGTACACTGCTTCCTCATGGACTTCTCCTCTTCCATCCTAA 1482 48.85 MKVGYEVVHGSVGTIQPHEQWDFSNCLRVVQPHTSSLLTKPLGENQSSNMESDELSEWVEHIANQLIDDSPDSNGCRTLHFDSSMESSQLGELVAKKTGSKPCFDDSSGMHQLNVGLRYREELSKVDEYGLTLISLLFECAVAISVDNLADAHRMLLALTQMATPYGSSCAERIVAYFAKAMASRVINSWLGMCFPLINHKSIHGALQVFNDVSPFIKFAHFTSNQAIFEAFHGRDRVHIVDLDIMEGLQWPALFHMLASRVEGPPKVRMTAIGTSMELLVETGTKLSNFARKLGISFEFYQIARKFGEIEASMVQLRRGETLAVHWLQHSLYDFNGSDWKTLSLIQTFKPKIFTLVEQDIIRGGSFLDRFVGSLHYYSAIFDSLGAYLPTDDPNRHHVESSLLYREINNILAIGGPSRSGEEKFEQWRSELRKSLTGVPASGNSVCQTQLMLSMFSPAQGYTLVNGDLGTLSLGWKGTNLYTASSWTSPLPS 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16542550 16544031 + Bpe020052.1 Bpe06g00551 105489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00551 493 ProSiteProfiles GRAS family profile. 124 488 IPR005202 -
Bpe06g00551 493 PANTHER OS05G0485400 PROTEIN 7 489 - -
Bpe06g00551 493 Pfam GRAS domain family 133 488 IPR005202 -
Bpe06g00551 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 489 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00717 Bpe-Chr3:27303309 Bpe06g00551 Bpe-Chr6:16542550 2.66E-112 dispersed
Bpe06g00551 Bpe-Chr6:16542550 Bpe11g01481 Bpe-Chr11:11017199 3.01E-72 dispersed
Bpe06g00551 Bpe-Chr6:16542550 Bpe02g02000 Bpe-Chr2:21717752 4.19E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21575 PF03514 GRAS 3.30E-98 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00551 - - pvy:116143160 640.958