Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00588 ATGGCCTCGACTCATAGACAATCAAGCTCGGGATCCGATGGGGATCTGAGATATGGTGCTGTCGACGAGAGGAAGAGGAAGAGAATGGAGTCTAATCGCGAATCAGCCAGACGGTCAAGGATGAGGAAGCAGAAGCAGATGGAGGATCTAACTGGCGAAATGAGTCGTTTGCAGCTTGCAAGCAATCAGCTTTTGCAGAGCATCAACGCCAAGGAACAGGCTTACGTTCAGGTGGAATCTGCAAATAATGTTTTGAGGGCTCAAGCAACGGAACTCACTGATCGTTTACGCTCATTGAACTCAGTTCTTCACATTGTTGAAGAAGTCAGTGGGCTGTCAATGGACATTCCTGAAATTCCTAGTCCCATGTTAAACCCTTGGCAATTTCAGCAGCCGATAATGGCGTCTGCTGACATGTTTCTGGTTTGA 429 47.55 MASTHRQSSSGSDGDLRYGAVDERKRKRMESNRESARRSRMRKQKQMEDLTGEMSRLQLASNQLLQSINAKEQAYVQVESANNVLRAQATELTDRLRSLNSVLHIVEEVSGLSMDIPEIPSPMLNPWQFQQPIMASADMFLV 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16741979 16742407 - Bpe020082.1 Bpe06g00588 105526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00588 142 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 85 IPR004827 GO:0003700|GO:0006355
Bpe06g00588 142 Gene3D - 22 104 - -
Bpe06g00588 142 Pfam bZIP transcription factor 24 78 IPR004827 GO:0003700|GO:0006355
Bpe06g00588 142 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Bpe06g00588 142 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 140 - -
Bpe06g00588 142 Coils Coil 26 60 - -
Bpe06g00588 142 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Bpe06g00588 142 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 140 - -
Bpe06g00588 142 MobiDBLite consensus disorder prediction 1 50 - -
Bpe06g00588 142 MobiDBLite consensus disorder prediction 17 50 - -
Bpe06g00588 142 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Bpe06g00588 142 SUPERFAMILY Leucine zipper domain 24 78 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00335 Bpe-Chr5:17210060 Bpe06g00588 Bpe-Chr6:16741979 1.97E-24 dispersed
Bpe06g00588 Bpe-Chr6:16741979 Bpe07g00418 Bpe-Chr7:4429589 6.14E-28 dispersed
Bpe06g00588 Bpe-Chr6:16741979 Bpe05g00113 Bpe-Chr5:2228970 1.88E-31 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21579 PF00170 bZIP_1 3.90E-08 CL0018 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00588 K25786 - jre:108981706 206.453