Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00598 ATGGTAGCAGAAGCCGAGGTTGTTTTGTGCCAACAGAGCGTTTCTGTTCTAGAGGGGGTTCAGTGCTTTGGTAATGGAAGCAATCACCATCGTCGTCTTGCTCGCGAGGTTGAAGATGTGGTCGATAATCCCAATTTCAACAAAGTTCGAGCTTCCGAGTCTGTTTCGGCCGAGTTGTCCGTCTCTCCAGCGGAGTTGGATTCCGACTCATCTCTCGAATCTGTCATTATTCCATTCAGGCCTAGCATCCGTTCCGGAAGCTTTGCCGACATCGGACCCCGTCCAAGCATGGAAGATGAACACATAAGAATAGATGATCTATCATCACATTTAGGACCACTCTTCCAGTTTCCCAACCCAAGTGCATTTTATGGGGTGTTTGACGGTCATGGAGGACATGAAGCTTCGTCCTTTATGAAAAAAAATGTGATGAGACTCTTTTTTAAAGAAAATTTTCCCCGTACTTCACGAGAAGTCGATGAGAATTTTTCGGAAGAACTCGTGGGCTGTTTCCACCGAGCATTTCTTCTGGCTGATCAAGCTTTGGCTGATGACTCTACTGTGAAAAAATCTTCTGGAACTACAGCTCTGACTGCTCTTATACTCGGAAGGCTTCTAATGGTGGCAAATGCTGGTGATTGCCGAGCTGTTCTTTCGAGGAAAGGAGAAGCAATAGACTTGTCTGAAGATCACAGGCCGGTTAACCCACCAGAACGAACCCGAATAGAAGAATCAGGCGGCTTTATCGACGATGGGTATCTAAACGGGGTTTTATCGGTTTCTAGAGCATTGGGGGACTGGGACGTGAAATCCCCTTACGGGTCATCACCTTCTCCGCTCATAGCCGAACCAGAGTGCAGACAAATGGTTTTAACAAAAGAAGACGAGTTTCTAATCATAGCCTGTGATGGGATTTGGGATGTTATGTCTAGTCAGCATGCAGTAAATATCGTTAAACGGGGGCTGAGCCGGTATGATGATCCTGACCGTTGTGCTCGGGACCTAGTGAGGGCGGCTCTACGGCTCCATACTTTTGATAATCTCACTGTGGTGGTGGTCTGCTTTTCTCAGCACTTTGCCAGCCCCAGCCAGCCCTCTCGGCCACAGAGGTTGAAACACTGCAACCTCTCGGAAGAGGCGATTTGCAGCCTGAAGAGATGGCTGGACAGCTGTGACAGCCATTGA 1185 48.19 MVAEAEVVLCQQSVSVLEGVQCFGNGSNHHRRLAREVEDVVDNPNFNKVRASESVSAELSVSPAELDSDSSLESVIIPFRPSIRSGSFADIGPRPSMEDEHIRIDDLSSHLGPLFQFPNPSAFYGVFDGHGGHEASSFMKKNVMRLFFKENFPRTSREVDENFSEELVGCFHRAFLLADQALADDSTVKKSSGTTALTALILGRLLMVANAGDCRAVLSRKGEAIDLSEDHRPVNPPERTRIEESGGFIDDGYLNGVLSVSRALGDWDVKSPYGSSPSPLIAEPECRQMVLTKEDEFLIIACDGIWDVMSSQHAVNIVKRGLSRYDDPDRCARDLVRAALRLHTFDNLTVVVVCFSQHFASPSQPSRPQRLKHCNLSEEAICSLKRWLDSCDSH 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16834966 16836882 + Bpe020093.1 Bpe06g00598 105536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00598 394 CDD PP2Cc 83 355 IPR001932 -
Bpe06g00598 394 SMART PP2C_4 74 353 IPR001932 -
Bpe06g00598 394 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 373 - -
Bpe06g00598 394 SUPERFAMILY PP2C-like 76 356 IPR036457 -
Bpe06g00598 394 SMART PP2C_SIG_2 99 355 IPR001932 -
Bpe06g00598 394 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Bpe06g00598 394 ProSiteProfiles PPM-type phosphatase domain profile. 84 355 IPR001932 -
Bpe06g00598 394 Gene3D - 73 361 IPR036457 -
Bpe06g00598 394 PANTHER PROTEIN PHOSPHATASE 2C 1 373 IPR015655 GO:0004722|GO:0006470
Bpe06g00598 394 Pfam Protein phosphatase 2C 94 347 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00598 Bpe11g00126 CCT
Bpe06g00598 Bpe11g00126 ECH
Bpe03g00504 Bpe06g00598 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00287 Bpe-Chr4:1838362 Bpe06g00598 Bpe-Chr6:16834966 7.95E-106 dispersed
Bpe06g00598 Bpe-Chr6:16834966 Bpe02g00524 Bpe-Chr2:3410677 3.28E-41 dispersed
Bpe14g01083 Bpe-Chr14:8110634 Bpe06g00598 Bpe-Chr6:16834966 1.25E-122 transposed
Bpe11g00126 Bpe-Chr11:899549 Bpe06g00598 Bpe-Chr6:16834966 1.70E-131 wgd
Bpe03g00504 Bpe-Chr3:24923462 Bpe06g00598 Bpe-Chr6:16834966 1.78E-105 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00598 K14803 - pvy:116138071 479.559