Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00604 ATGGGCTTTTTTTGTTGCGGCGGAGATGATGATGTCCGGCACACTCCTAATAATGGAGGGGTACATGCAATGAAAATGCCAGCAGTGCAGGACAGTCGCAACCGGCACCCTGAAATTGCGCATAAGGTCCCACAAATTGTAAAACGTCAGCCTATTGACGTCTCGGCCATACGAGCAGATGAACTGAACGAAGTTACAAATAACTTCGGAACGGATTGTTTGATCGGAGAAGGTTCATTTGGGAGAGTTTACCATGGCGTTCTGAGAAATGGTCAAGAAGCAGCAATTAAAAAGTTAGATGCAAGCAAACAACCCATCGACGAATTCCTAGCCGAGGTTTCCTTGGTTTCGAGGCTGAAGCATGGAAATTTTGTCCAATTACTCGGCTATTGCGTCGACGGGAATTCCCGTATACTTGCCTATGAGTTCGCATCGAATGGGTCCCTTCATGACATTTTACATGGTAGGAAAGGCGTGAAAGGCGCACAGCCAGGTCCGGTTCTGACCTGGGCGCAACGAGTGAAAATTGCTGTGGGGGCTGCCAGAGGGCTTGAGTACTTGCATGAAAAAGCCGATCCTCATGTCATTCATCGGAATATCAAGTCCAGCAATGTGCTAATCTGTGACGACGATATTGCTAAAATTGCTGACTTTGATTTATCGAATCAAGCTCCAGATATGGCAGCTCATCTTCATTCTACCCGTGTTCTTGGCACCTTCGGTTACCACGCTCCAGAATATGCAATGACCGGACAGTTGAATGCCAAGAGTGATGTCTATAGCTTCGGTGTCGTTTTGCTCGAACTCTTGACAGGTAGAAAGCCAGTCGATCCTACATTGCCTCGAGGGCAGCAAAGTCTCGTCACTTGGGCTACTCCGAAACTCAGCGAAGACAAAGTCAGGCAGTGTGTCGATGCAAGACTAGGAGGAGATTACCCCCCCAAGGCTGTCGCAAAGTTGGCTGCAGTGGCTGCCTTGTGTGTACAATACGAGGCAGATTTTCGACCAAACATGAGCATTGTGGTCAAGGCCCTTCAGGCCCTGTTAGTCGCCCGGACCGGTGCAGATACACCAAGCTTGTGA 1083 48.85 MGFFCCGGDDDVRHTPNNGGVHAMKMPAVQDSRNRHPEIAHKVPQIVKRQPIDVSAIRADELNEVTNNFGTDCLIGEGSFGRVYHGVLRNGQEAAIKKLDASKQPIDEFLAEVSLVSRLKHGNFVQLLGYCVDGNSRILAYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAARGLEYLHEKADPHVIHRNIKSSNVLICDDDIAKIADFDLSNQAPDMAAHLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDPTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQALLVARTGADTPSL 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16880210 16882997 + Bpe020099.1 Bpe06g00604 105542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00604 360 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00604 360 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Bpe06g00604 360 Gene3D Transferase(Phosphotransferase) domain 1 144 356 - -
Bpe06g00604 360 PIRSF ILK 40 354 - -
Bpe06g00604 360 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672|GO:0006468
Bpe06g00604 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 354 - -
Bpe06g00604 360 SUPERFAMILY Protein kinase-like (PK-like) 53 345 IPR011009 -
Bpe06g00604 360 Gene3D Phosphorylase Kinase; domain 1 29 143 - -
Bpe06g00604 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00573 Bpe-Chr4:3640298 Bpe06g00604 Bpe-Chr6:16880210 2.42E-155 dispersed
Bpe06g00604 Bpe-Chr6:16880210 Bpe13g00731 Bpe-Chr13:13876432 7.07E-161 dispersed
Bpe06g00604 Bpe-Chr6:16880210 Bpe14g01077 Bpe-Chr14:8064746 1.70E-161 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63397 PF07714 PK_Tyr_Ser-Thr 7.70E-47 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00604 K13436 - tcc:18613791 563.148