Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00633 ATGGCAGACCCTTATACCAATTTCTTCAACGGCTGGTTCAGCTTCATGCCTGTAGCTCCGCATTTTTCTTCTCTCACTTCTTACTACTCAGAACCCTCTTTTAATTTCTCTGCTCCTTTTCCCAGCTTGAACAAGGACGAGGACGACATCATAAATACTAGTCAAAGTACTGCTAATTCCTCCTTCCAATCTCATTCCTTATTTCCGCCGTTATCTGATCTCTCGACTCCTTACATACAAGCTCTTCCTTTGATAAACCAATTAAACACAGATATTTACGAAAACTCTGGCAGTGCAGCAATGGAGGAGAAAGAGGCGAAGGATTTGGCCAACGAAGAGGACGATGAATCCTTGTCTGTGGCTCTAAGCTTAGGCCTTCCTTGCCCTAATTTAGATTCAGAAACAAAGGAAATTATTTCTCCTTCATTTTCGTGTTCGGGCGAGAAGGATGAAAGCAGTTTGGTTTCAGATTACCCTTTGTATAAACTGAACAATGGCCAGTACTGGATTCCTACCCCTTCTCAGATTCTGATTGGTCCTACTCAATTTTCATGTCCACTTTGCTCTAAGGCTTTCAACAGATACAATAATCTCCAGATGCATATGTGGGGCCATGGCTCACAATACAGAAAAGGGCCAGACTCTCTGAAAGGAATCCAGCCAACCGCCATGTTAAAGCTGCCTTGCTACTGCTGCGCAAATGGCTGCAAATACAACATCGACCACTCTCGATCAAGGCCGCTCAAAGATTTCAGAACTCTGCAAACCCATTACAAAAGAAAGCACGGGACTAAACCCTTCAGTTGCAGGAAATGCAGCAAACCATTTGCAGTGAAAGGCGACTGGAGAACCCACGAGAAGAACTGTGGGAAAATTTGGTATTGCTCTTGTGGATCTGATTTTAAGCACAAAAGATCGCTGAAAGATCACGTTAGGGCTTTCGGCCATTGCCATGGAGCTGTTGGCCTTGATTGCTTTGAAGAAGAGAACGATCCTTCGTCTGAAGTGGAACAAGATGGTTATAGTTTAACGTGA 1035 43.86 MADPYTNFFNGWFSFMPVAPHFSSLTSYYSEPSFNFSAPFPSLNKDEDDIINTSQSTANSSFQSHSLFPPLSDLSTPYIQALPLINQLNTDIYENSGSAAMEEKEAKDLANEEDDESLSVALSLGLPCPNLDSETKEIISPSFSCSGEKDESSLVSDYPLYKLNNGQYWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPDSLKGIQPTAMLKLPCYCCANGCKYNIDHSRSRPLKDFRTLQTHYKRKHGTKPFSCRKCSKPFAVKGDWRTHEKNCGKIWYCSCGSDFKHKRSLKDHVRAFGHCHGAVGLDCFEEENDPSSEVEQDGYSLT 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17106550 17108883 + Bpe020121.1 Bpe06g00633 105571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00633 344 SUPERFAMILY beta-beta-alpha zinc fingers 176 205 IPR036236 -
Bpe06g00633 344 ProSitePatterns Zinc finger C2H2 type domain signature. 185 205 IPR013087 -
Bpe06g00633 344 ProSiteProfiles Zinc finger C2H2 type domain profile. 183 210 IPR013087 -
Bpe06g00633 344 PANTHER ZINC FINGER PROTEIN WIP2 1 339 IPR043584 GO:0003700|GO:0010468
Bpe06g00633 344 Gene3D Classic Zinc Finger 182 205 - -
Bpe06g00633 344 SUPERFAMILY beta-beta-alpha zinc fingers 253 287 IPR036236 -
Bpe06g00633 344 SMART c2h2final6 293 316 IPR013087 -
Bpe06g00633 344 SMART c2h2final6 183 205 IPR013087 -
Bpe06g00633 344 SMART c2h2final6 267 287 IPR013087 -
Bpe06g00633 344 Gene3D Classic Zinc Finger 225 316 - -
Bpe06g00633 344 PANTHER ZINC FINGER PROTEIN WIP2-LIKE 1 339 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00633 Bpe10g00553 CCT
Bpe06g00633 Bpe10g00553 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00007 Bpe-Chr2:71469 Bpe06g00633 Bpe-Chr6:17106550 4.49E-129 dispersed
Bpe04g00552 Bpe-Chr4:3498947 Bpe06g00633 Bpe-Chr6:17106550 8.38E-128 dispersed
Bpe06g00633 Bpe-Chr6:17106550 Bpe13g01331 Bpe-Chr13:18557497 5.25E-94 dispersed
Bpe08g00206 Bpe-Chr8:1146296 Bpe06g00633 Bpe-Chr6:17106550 5.38E-103 transposed
Bpe10g00553 Bpe-Chr10:12575854 Bpe06g00633 Bpe-Chr6:17106550 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21580 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00633 - - qsu:111986391 429.869