Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00652 ATGGAGCTTGGCCTTAGCTTGGGAGATGTGTCCAAGCCATTTGGATTTGTAGAAAAATCTCGCAACCGAAGAGTTTCGGCGAAAGATTTAGGCTTTTGCGCGGGTTTATCCATTGGATCGACAGCTTTCGCCGGAGAGAAGGACGCGGGAGATGCGGAAGAAGAAGAAGAGAATGAAAACCGGGAAGGAAATCAGTTTTACAGAGAAGAGGATGAGGCTCGATTAGTTTCTGATGATGGACCAGTTCAGCTTGACCTTCTTCCCCACACTCCTGTTCCTCGGAATCTTCCAAGTTCTATCCATGGCTTCCACTTACCGGCGTCTGAAGACGGTAGTTCGGAAGCTGGTTCTTCAGCAAGAGGCCTCGACGTGAATCGAATACCCTCGACGGAGGCGGACGACGGAGACGCATCGCCGACGTACGATGCGGCGATGTCGTTTCCGATGTATATTGGTGGAGGAGACGGCGCCGGAAATGAAATGGGAGAGGCGGACAGAGCTTCCAGAGCCAGCGACGACGACGATAATGGCTCCGGCAGGAAAAAACTCAGACTTTCCAAAGAACAATCTGCTTTCTTAGAAGAAAGCTTTAAAGAACACAACACATTAAACCCAAAGCAAAAGCTTGCTCTAGCGAATCATCTCAATCTCCGACCTCGCCAAGTAGAAGTCTGGTTTCAAAATCGGAGAGCAAGGACGAAATTGAAGCAGACGGAGGTGGATTGCGAGTACTTAAAGAGATGCTGCGAGACACTAACAGCAGAAAATCGACGGCTGCAGAAAGAGCTGCAAGAGCTGAGAGCGTTGAAGAGCTCCAACTCATTCTACATGCAATTGCCGGCGACGACTCTGACCATGTGCCCGTCGTGCGAGCGTGTCGCCCCCTCCTCGACGTCGGCGACCACCGCCGCCGCAGCAGCTTCGAAGACCCACACCGAGCCCGTAAAAGCGTCATCTGGGTTATCTTTTAGCCGACCCAGGTCCTATCCTTTCAGTCCGCACCACCATTCCACGCCTTCGTGA 1023 52.0 MELGLSLGDVSKPFGFVEKSRNRRVSAKDLGFCAGLSIGSTAFAGEKDAGDAEEEEENENREGNQFYREEDEARLVSDDGPVQLDLLPHTPVPRNLPSSIHGFHLPASEDGSSEAGSSARGLDVNRIPSTEADDGDASPTYDAAMSFPMYIGGGDGAGNEMGEADRASRASDDDDNGSGRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALANHLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTAENRRLQKELQELRALKSSNSFYMQLPATTLTMCPSCERVAPSSTSATTAAAAASKTHTEPVKASSGLSFSRPRSYPFSPHHHSTPS 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17223437 17224713 - Bpe020138.1 Bpe06g00652 105590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00652 340 Pfam Homeodomain 180 234 IPR001356 GO:0003677
Bpe06g00652 340 ProSitePatterns 'Homeobox' domain signature. 211 234 IPR017970 GO:0000981|GO:0006355
Bpe06g00652 340 ProSiteProfiles 'Homeobox' domain profile. 176 236 IPR001356 GO:0003677
Bpe06g00652 340 SUPERFAMILY Homeodomain-like 172 237 IPR009057 -
Bpe06g00652 340 Pfam Homeobox associated leucine zipper 236 270 IPR003106 GO:0006355|GO:0043565
Bpe06g00652 340 PANTHER - 75 333 - -
Bpe06g00652 340 PANTHER PROTEIN, PUTATIVE-RELATED 75 333 - -
Bpe06g00652 340 CDD bZIP 229 268 - -
Bpe06g00652 340 MobiDBLite consensus disorder prediction 61 78 - -
Bpe06g00652 340 CDD homeodomain 180 237 IPR001356 GO:0003677
Bpe06g00652 340 Coils Coil 249 272 - -
Bpe06g00652 340 MobiDBLite consensus disorder prediction 43 141 - -
Bpe06g00652 340 MobiDBLite consensus disorder prediction 165 183 - -
Bpe06g00652 340 SMART halz 236 279 IPR003106 GO:0006355|GO:0043565
Bpe06g00652 340 Gene3D - 184 234 - -
Bpe06g00652 340 MobiDBLite consensus disorder prediction 298 340 - -
Bpe06g00652 340 MobiDBLite consensus disorder prediction 154 183 - -
Bpe06g00652 340 SMART HOX_1 178 240 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01152 Bpe-Chr3:30572530 Bpe06g00652 Bpe-Chr6:17223437 1.08E-92 dispersed
Bpe06g00652 Bpe-Chr6:17223437 Bpe15g00281 Bpe-Chr15:14286829 9.17E-63 dispersed
Bpe02g01981 Bpe-Chr2:21620980 Bpe06g00652 Bpe-Chr6:17223437 4.33E-48 transposed
Bpe14g01007 Bpe-Chr14:7463407 Bpe06g00652 Bpe-Chr6:17223437 1.39E-47 transposed
Bpe10g00572 Bpe-Chr10:12688150 Bpe06g00652 Bpe-Chr6:17223437 1.13E-173 wgd
Bpe11g00083 Bpe-Chr11:567014 Bpe06g00652 Bpe-Chr6:17223437 1.53E-62 wgd
Bpe04g01452 Bpe-Chr4:21149666 Bpe06g00652 Bpe-Chr6:17223437 3.95E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21582 PF00046 Homeodomain 1.10E-15 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00652 K09338 - pvy:116133233 340.117