Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00677 ATGCCCATCACTGATTCAAGTTCTGGGCAGCCGCAGTTCATAGCAAGCACTGGAAACAGAAGTTTTTCTAATGTGCCGTTGATTGGGAACTCAGAATCTGATCAGATTGTTGTTCCTGATAGGAAAAGCTGGAGAAATCTATTTGCATACATGGGTCCTGGATTTCTGGTTTCAATTGCATATATTGACCCTGGAAATTTCGAGACGGATTTACAGTCGGGAGCAGAATACAAATACGAGCTACTTTGGATCATACTAGTGGCTTCATGTGCTGCTCTGGTTATTCAGTCCTTGGCTGCCAATCTTGGAGTTGTCACGGGAAAGCATTTAGCAGAGCATTGCCGAACTGAATATCCTAGAGTTCCCAACTTCATTCTATGGGTGCTGGCTGAAATTTCGATAGTTGCATGCGACATTCCCGAGGTCATAGGAACGGCTTTTGCTTTGAATATGCTCTTCAAAATTCCTGTTTGGAGTGGTGTTCTTCTGACTGGGCTGAGCACGTTGATGCTTCTAGCGTTACAACAATACGGGGTTAGGAAGCTCGAATTCTTGATAGCTTTTCTTGTACTTACAATTGCTGTGTGCTTCTTTATGGAGCTCGGCTATGCTAAGCCTGTAGCTTCGGAAGTTCTTTACGGGCTTTTTGTCCCTCAACTCAAAGGAAATGGTGCTACTGGTCTTGCCATTTCTCTTCTCGGGGCTATGGTTATGCCGCACAATCTCTTCCTTCACTCGGCTTTGGTTCTATCCCGAAAGATTCCACGATCCGTTCGAGGAATTGAGGAAGCTTGCAGATTTTACTTGATAGAGAGCGCCTTTGCTCTCACGATTGCCTTCCTCATAAACGTGTCAGTCATTTCGGTAACTGGTGCGGTTTGCAATTCACCGGACTTAAACGCAGAAGACAAGATGAGCTGCAAAGACTTGGACTTGAACTCAGCATCTTTTTTGCTTAGAAATGTGTTGGGTAGTTGGAGTTCGAAGCTTTTCGCAATTGCTTTGTTAGCATCTGGCCAGAGTTCTACCATTACTGGCACTTATGCAGGGCAGTATGTTATGCAGGGATTTCTCGATTTACGACTGAAGCCATGGCTGCGGAACTTTCTAACTCGATGTTTGGCAATCGTGCCTAGTTTGATTGTTGCTGTCATTGGCGGCTCCGCCGGAGCTGGGAGGCTTATCATCATAGCATCGATGATTTTGTCATTTGAACTACCCTTTGCTCTTGTTCCTCTTCTCAAATTCACTAGCAGCAAGAGCAAGATGGGGATGTACGCCAATTCAACTGCAATTTCAGCGGTCACCTGGATAGTTGGCTTCCTGATCATGTCCATTAACATATACTATCTCATATCAGGCTTTTTAAGTCTTCTTCTTCACAGCCATTTAGGCATCGTGGCTGTTGTGTTCGTCGGGATTGCAGGATTCTCAGCCATTGCCGTGTATTTGGCTGGAATCTCATATCTGATTTTCCGGAAAAACAGAGAAGCTACTAATCTTCTTGCCTTGACTATGCCGGAAAGTCGGCAAGCTGCTACCGGAATTGGCAACGGAACAACTCATTGCCTCCCCAGAGAAGATATAGTCTCCATGCAATTACCTCAGAAAAGCAGTACAGCTGATATCGACTGA 1635 45.08 MPITDSSSGQPQFIASTGNRSFSNVPLIGNSESDQIVVPDRKSWRNLFAYMGPGFLVSIAYIDPGNFETDLQSGAEYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEHCRTEYPRVPNFILWVLAEISIVACDIPEVIGTAFALNMLFKIPVWSGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVLTIAVCFFMELGYAKPVASEVLYGLFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIEEACRFYLIESAFALTIAFLINVSVISVTGAVCNSPDLNAEDKMSCKDLDLNSASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVAVIGGSAGAGRLIIIASMILSFELPFALVPLLKFTSSKSKMGMYANSTAISAVTWIVGFLIMSINIYYLISGFLSLLLHSHLGIVAVVFVGIAGFSAIAVYLAGISYLIFRKNREATNLLALTMPESRQAATGIGNGTTHCLPREDIVSMQLPQKSSTADID 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17405797 17409129 + Bpe020162.1 Bpe06g00677 105615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00677 544 Hamap Divalent metal cation transporter MntH [mntH]. 39 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe06g00677 544 PANTHER METAL TRANSPORTER NRAMP1 12 544 - -
Bpe06g00677 544 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe06g00677 544 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe06g00677 544 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe06g00677 544 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe06g00677 544 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe06g00677 544 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe06g00677 544 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe06g00677 544 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 12 544 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe06g00677 544 Pfam Natural resistance-associated macrophage protein 67 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe06g00677 544 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 45 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00446 Bpe-Chr2:2912104 Bpe06g00677 Bpe-Chr6:17405797 7.98E-106 dispersed
Bpe03g01283 Bpe-Chr3:31364650 Bpe06g00677 Bpe-Chr6:17405797 9.14E-37 dispersed
Bpe04g01576 Bpe-Chr4:22069577 Bpe06g00677 Bpe-Chr6:17405797 1.24E-39 dispersed
Bpe06g00677 Bpe-Chr6:17405797 Bpe13g00112 Bpe-Chr13:7212742 6.20E-105 dispersed
Bpe02g00634 Bpe-Chr2:4141432 Bpe06g00677 Bpe-Chr6:17405797 0 transposed
Bpe10g00595 Bpe-Chr10:12862460 Bpe06g00677 Bpe-Chr6:17405797 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00677 K21398 - gmx:100797298 857.055