Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00678 ATGCCGGTCGATTCCTTTTCATTTCCCGGCCAGACTGTATGCGTCACTGGCGCCGGAGGTTTCATCGCCTCTTGGATCGTTAAACTGCTGCTTGAGAAGGGTTATACTGTTAGAGGAACTGTGAGAAATCCAGATGATCCGAAGAACGCTCACTTGAAAGAGCTGAATGGAGCAAAGGAGAGGTTAACTTTGTGTAAGGCTGATCTTCTAGATTACCCTAGCCTGAAAGCGGCGATTGATGGATGCGATGGTGTTTTTCATACTGCATCGCCTGTAACGGATGATCCTGAACAAATGGTGGGGCCGGCGGTGGATGGGACCAAAAATGTGATAATCGCAGCCGCTGAGGCAACTGTTCGGAGAGTTGTGTTCACCTCGTCCATCGGTGCCGTTTATATGGATCCTTATCGGAGTCCCGACGTCGTCGTCGATGAGTCTTGCTGGAGTGACCTAGATTTCTGCAAAAACACTAAGAATTGGTACTGCTACGGGAAAGCTGTGGCGGAACAGGCGGCGTGGGAGGAGGCGAAGGAGAGAAAAGTGGACCTTGTGGTGGTGAATCCAGTTCTTGTCTTAGGGCCATTACTCCAACCCTCCATTAACGCAAGCACAGTTCACATTCTCAAGTACTTGACCGGCTCGGCCAAGACTTACGCTAACTCCGTCCAAGCTTACGTCCATGTTAGAGACGTCGCCCTCGCCCATATTCTAGTCTACGAAACTCCCTCCGCCGCCGGCCGATTTCTCTGCGCCGAAAGCGTACTTCACCGCGGTGACGTCGTCCAAATTCTGGTCAAGTTCTTCCCAGAATATCCCATTCCCACCAAGTGTTCAGACGAAGTTAACCCAAGAAAGAAGCCATACAAGCTCTCTAACCAGAAGCTCAAGGACCTTGGATTGGAGTTCGCATCTGTCAAACAGTGTCTCTATGAAACTGTGAAGAGCCTCCAAGAAAAAGGTCATCTCCCTCTGCCTACACCATCAGAGGAT 990 50.51 MPVDSFSFPGQTVCVTGAGGFIASWIVKLLLEKGYTVRGTVRNPDDPKNAHLKELNGAKERLTLCKADLLDYPSLKAAIDGCDGVFHTASPVTDDPEQMVGPAVDGTKNVIIAAAEATVRRVVFTSSIGAVYMDPYRSPDVVVDESCWSDLDFCKNTKNWYCYGKAVAEQAAWEEAKERKVDLVVVNPVLVLGPLLQPSINASTVHILKYLTGSAKTYANSVQAYVHVRDVALAHILVYETPSAAGRFLCAESVLHRGDVVQILVKFFPEYPIPTKCSDEVNPRKKPYKLSNQKLKDLGLEFASVKQCLYETVKSLQEKGHLPLPTPSED 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17409383 17411441 - Bpe025968 Bpe06g00678 105616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00678 330 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 325 - -
Bpe06g00678 330 CDD FR_SDR_e 13 300 - -
Bpe06g00678 330 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Bpe06g00678 330 Gene3D - 4 330 - -
Bpe06g00678 330 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 325 - -
Bpe06g00678 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 317 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00678 Bpe-Chr6:17409383 Bpe09g00448 Bpe-Chr9:11853178 0 dispersed
Bpe10g00534 Bpe-Chr10:12421322 Bpe06g00678 Bpe-Chr6:17409383 6.19E-76 transposed
Bpe11g01699 Bpe-Chr11:13265800 Bpe06g00678 Bpe-Chr6:17409383 4.57E-63 transposed
Bpe10g00596 Bpe-Chr10:12867041 Bpe06g00678 Bpe-Chr6:17409383 0 wgd
Bpe06g00678 Bpe-Chr6:17409383 Bpe09g00447 Bpe-Chr9:11844856 1.74E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00678 K09753 - zju:107409091 581.637