Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00684 ATGAATCATCGTCTTCTTCTTTTACCAACTCTGTCGGTGTTGGATAACTCTCTGCTGTCTCTAATCATTGCTGCCAGACCCGACCCTGGCTCAGGATCCTCCACCTTCGGGTCTTGCTTTCTCGCCCAGGAAGACCCAGGTCTTCATTTTTCTGCAAAAATGGAAGCTCAATCTTCAGGAGTAGCCCAAAATTTGAACAAGAGAATTCTCATAGCTTTAATAGTTGCCTGCACTCTTCTTTGTGGAATTATGCTCTATCTCTTATGTTTCTGGATTTATCGAAGGAAGAAATCGAAGAATTCTGCTGGAAAGACAGTAAAGAACTCAGAGGCTAAATCCGGGTCGTCGTTGAGTCAAATCATGGCAAGGTTTAATTCGCCGAGGTCCGCCAGTACAAAAGATTCGATAGGTGTAATCGAATATAATTTGTTAGAAGCTGCAACGAACAACTTTGGAGAGAGTAATTTCATGGGTGAAGATTGTTCCACACATGTTTACAAAGCTTGTTTCGACAACAAAACGGCAGCAGCCGTGAAGAGGATAGATAACATCAGTGAAGACGGCAAAAGAGAATTCGAGAACGAGATAAATTGGCTGAGCAAAATTCGGCATCAGAATATTACTAAACTCTTGGGATACTGTATTCATGGAGAAACGAGAATAATCGTCTGTGAAATGATGCAGAACAGATCTTTAGAAGCTCAACTGCACGGGCCCTCTAAAGGATCATCGCTGACTTGGCATCTACGAATCAAGATAGCCATTGATATTGCTAGGGGGTTGGAATATCTACACGAGCATTGCAATCCGCCTGTAATCCATAGAGATTTGAAATCGTCGAATATTCTTCTTGATTCTAACTTCAACGCCAAGCTTTCGAATTTTGGCCTTGCGATAGCCTTAGGAGAACAAAATGATGACATAAAACTAACCGGAACTTTGGGTTATGTGGCCCCAGAATATCTGTCTGATGGTAAATTAACAGATAAAAGCGATGTCTACTCCTTTGGCGTTGTTCTTCTAGAGCTTCTAACAGGAAAATGGCCGATAGAGAAGATGGAAACTTCTCGGTCCAAATCGATCGTTGCATGGGCGATTCCTCAACTTAGCGATCGATCAAAGCTTCCGACCATTGTTGATCCCGTGATTAAAGATACCATGGATTTAAAGCACTTATACCAAGTTGCTGCTGTTGCGGTTTTATGTGTTCAACCAGAGTCTAGCTATCGGCCGTTGATTACAGATGTTCTTCATTCTCTGATCCCGCTTGTTCCCGTTGAGCTTGGAGGTTCGCTTAGATTAAACGGGCCGGTTCTTCCAATTGAGATCGAACGATCTGAATGTGTTTGA 1350 42.59 MNHRLLLLPTLSVLDNSLLSLIIAARPDPGSGSSTFGSCFLAQEDPGLHFSAKMEAQSSGVAQNLNKRILIALIVACTLLCGIMLYLLCFWIYRRKKSKNSAGKTVKNSEAKSGSSLSQIMARFNSPRSASTKDSIGVIEYNLLEAATNNFGESNFMGEDCSTHVYKACFDNKTAAAVKRIDNISEDGKREFENEINWLSKIRHQNITKLLGYCIHGETRIIVCEMMQNRSLEAQLHGPSKGSSLTWHLRIKIAIDIARGLEYLHEHCNPPVIHRDLKSSNILLDSNFNAKLSNFGLAIALGEQNDDIKLTGTLGYVAPEYLSDGKLTDKSDVYSFGVVLLELLTGKWPIEKMETSRSKSIVAWAIPQLSDRSKLPTIVDPVIKDTMDLKHLYQVAAVAVLCVQPESSYRPLITDVLHSLIPLVPVELGGSLRLNGPVLPIEIERSECV 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17437770 17440119 - Bpe020168.1 Bpe06g00684 105622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00684 449 Gene3D Transferase(Phosphotransferase) domain 1 227 425 - -
Bpe06g00684 449 PANTHER BNAC02G46490D PROTEIN 4 440 - -
Bpe06g00684 449 Pfam Protein kinase domain 157 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00684 449 SUPERFAMILY Protein kinase-like (PK-like) 129 420 IPR011009 -
Bpe06g00684 449 SMART serkin_6 151 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00684 449 Gene3D Phosphorylase Kinase; domain 1 111 226 - -
Bpe06g00684 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Bpe06g00684 449 PANTHER OS01G0750732 PROTEIN 4 440 - -
Bpe06g00684 449 ProSiteProfiles Protein kinase domain profile. 151 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00684 Bpe-Chr6:17437770 Bpe12g00262 Bpe-Chr12:2483157 9.57E-86 dispersed
Bpe06g00684 Bpe-Chr6:17437770 Bpe03g00797 Bpe-Chr3:27918991 2.20E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63400 PF00069 Pkinase 1.90E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00684 - - csv:101211571 587.03