Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00699 ATGGCTGCCGACGTTATTTTCACGGTCAAGGACGATAATCCAATCGGGGCGAGTCTAATCGGAAGGGCATACGTACCAGTCCAAGAGATTTTAAATGGGCAAGAAGTCGATAAATGGGTTGAAATCTTAGACAATGACAAAAACCCTATCCATGGAAACTCTAAAATTCATGTCAAGCTTCAATATTTTGATGTCTCTGAGGAACGATGTTGGGGTCGGGGGATTAAAAGTGCAAAATATCCAGGAGTTCCTTACACATTTTTCTCTCAGCGACAAGGATGTAAGGTCTCTTTGTACCAAGATGTTCACATTCCTGACGGTTTTGTTCCTAAAATCCCGCTTGCGGGTGGGAAGTTCTACGAGCCTCACCGATGTTGGGAAGATGTTTTTGATGCGATAAACAATGCAAAGCACCTCATCTACATTACGGGTTGGTCTGTTTATACGGAAATTACTCTAATTAGGGACTCGAGGAGGCCTAAACCGGGTGGAGATATCATTCTTGGGGACCTACTGAAGAAGAAAGCAAGTGAAGGAGTTAGAGTTCTTATGCTTGTTTGGGATGATAGAACTTCTGTCCCTATACTCAAAAAAGACGGACTGATGGCCACTCACGACCAAGAAACTGAACATTTCTTCGATAATAGTGAGGTGCATTGTGTCCTCTGCCCTCGGAATCCCGATGATGGTGGAAGCATAATTCAAGATTTGCAAATCTCTACTATGTTCACTCATCATCAAAAGATTGTCGTGGTGGATAGTGCTATGCCAAGTGAAGGATCAGAAAAAAGGCGAATTGTGAGTTTTGTTGGCGGAATCGATCTTTGTGATGGAAGATATGATACGCCGTTCCATTCGCTTTTCAGGACATTGGATACGGCCCATCACAACGATTTTCACCAGCCAAACTTTGCTGGAGCTACGATCGCTAAAGGAGGACCTAGAGAGCCTTGGCACGATATTCACTCCCGGCTCGAAGGGCCCATCGCGTGGGATGTATTGTTTAATTTTGAGCAGAGATGGAGGAAGCAAGGCGGGCAGGATATTCTTCTTCAACTGAGGGATATGGAGGAAATAATCATCCCACCTTCTCCGGTTATGTTCCCGGATGATCGTGAAACTTGGAATGTTCAGTTGTTTCGGTCGATCGATGGCTTTCCTGAAAAACCAGAAGATGCCGCAAGAGCTGGACTTGTCAGCGGGAAAGATAATATCATCGATAGAAGCATTCAAGATGCGTATATAAACGCTATTAGGCGGGCCAAAAATTTTATTTACATTGAAAATCAGTATTTCTTGGGGAGCTGTTTTGGTTGGAGCCCTGATGATATCAAGCCTGAAGATATTGGAGCTCTGCATCTGATTCCAAAGGAGCTTTCCATGAAGATTGTTAGTAAGATTGAAGCCGGAGAGAGATTTTCGGTCTATATTGTTGTCCCTATGTGGCCGGAGGGAATGCCGGAAAGTGGATCAGTTCAGGCCATATTAGATTGGCAGAGGAGGACGTTGGAGATGATGTACAAAGATATCACTCAGGCCTTAAACGCAAAGGGTATTGAGGAAGACCCTCGAAACTATTTGACGTTCTTCTGTCTCGGAAATCGTGAAGTTAAGAAGCCAGGGGAGTATGAACCTTCGGAAAAACCAGAGGAGGATACAGATTATATGAGAGCTCAGCAGGCTAGGCGATTCATGATTTATGTTCATGCCAAGATGATGATCGTGGACGATGAGTACATAATCATCGGCTCGGCCAATATCAACCAAAGGTCAATGGATGGAGCAAGAGACTCGGAGATAGCCATGGGGGCCTACCAGACGTGTCATCTGTCGACCCACGTCCCGGCTCGTGGGCAAATCCATGGTTTTAGAATGTTGTTATGGTACGAACACCTCGGAATGCTCGACGATTGCTTCCTTCAGCCCGAGAGCGAGGAATGTGTGAAGAAGGTGAATCACATTGCCGACAAGTACTGGGATCTCTACTCCGGTGAGACTCTGGAGCATGACCTGCCCGGCCACCTCCTTCGTTATCCGATCGGAGTTTCCGGCGAAGGAGAAGTCACGGAGCTGCCAGGATTCGAGCACTTTCCGGACACTAAAGCTCGAGTGCTTGGAACCAAATCTGACTATCTCCCTCCCATTCTCACCACTTAG 2157 45.99 MAADVIFTVKDDNPIGASLIGRAYVPVQEILNGQEVDKWVEILDNDKNPIHGNSKIHVKLQYFDVSEERCWGRGIKSAKYPGVPYTFFSQRQGCKVSLYQDVHIPDGFVPKIPLAGGKFYEPHRCWEDVFDAINNAKHLIYITGWSVYTEITLIRDSRRPKPGGDIILGDLLKKKASEGVRVLMLVWDDRTSVPILKKDGLMATHDQETEHFFDNSEVHCVLCPRNPDDGGSIIQDLQISTMFTHHQKIVVVDSAMPSEGSEKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHNDFHQPNFAGATIAKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGQDILLQLRDMEEIIIPPSPVMFPDDRETWNVQLFRSIDGFPEKPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFGWSPDDIKPEDIGALHLIPKELSMKIVSKIEAGERFSVYIVVPMWPEGMPESGSVQAILDWQRRTLEMMYKDITQALNAKGIEEDPRNYLTFFCLGNREVKKPGEYEPSEKPEEDTDYMRAQQARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQTCHLSTHVPARGQIHGFRMLLWYEHLGMLDDCFLQPESEECVKKVNHIADKYWDLYSGETLEHDLPGHLLRYPIGVSGEGEVTELPGFEHFPDTKARVLGTKSDYLPPILTT 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17567797 17570049 - Bpe020186.3 Bpe06g00699 105637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00699 718 SMART pld_4 241 279 IPR001736 GO:0003824
Bpe06g00699 718 SMART pld_4 564 591 IPR001736 GO:0003824
Bpe06g00699 718 CDD PLDc_pPLDalpha_2 402 611 - -
Bpe06g00699 718 SUPERFAMILY Phospholipase D/nuclease 73 355 - -
Bpe06g00699 718 Pfam Phospholipase D C terminal 636 708 IPR024632 -
Bpe06g00699 718 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 65 IPR035892 -
Bpe06g00699 718 Gene3D C2 domain 1 70 IPR035892 -
Bpe06g00699 718 PIRSF PLD_plant 1 718 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bpe06g00699 718 Gene3D Endonuclease Chain A 387 606 - -
Bpe06g00699 718 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 241 279 IPR001736 GO:0003824
Bpe06g00699 718 PANTHER PHOSPHOLIPASE D 1 718 IPR015679 -
Bpe06g00699 718 SUPERFAMILY Phospholipase D/nuclease 357 648 - -
Bpe06g00699 718 Pfam Phospholipase D Active site motif 565 591 IPR001736 GO:0003824
Bpe06g00699 718 Pfam Phospholipase D Active site motif 241 279 IPR001736 GO:0003824
Bpe06g00699 718 Gene3D Endonuclease Chain A 117 358 - -
Bpe06g00699 718 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 564 591 IPR001736 GO:0003824
Bpe06g00699 718 PANTHER PHOSPHOLIPASE D ALPHA 1 1 718 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00699 Bpe-Chr6:17567797 Bpe10g00609 Bpe-Chr10:12949089 0 dispersed
Bpe10g00689 Bpe-Chr10:13372273 Bpe06g00699 Bpe-Chr6:17567797 0 transposed
Bpe02g01247 Bpe-Chr2:16001717 Bpe06g00699 Bpe-Chr6:17567797 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00699 K01115 - twl:120010960 1314.29