Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00715 ATGAAGAGTGAAGAAAATTTGATTACGGGTATTGTTAAAGAGCCTTCTGGCAGAATAACTCGTGCTCGAGCTGCTGCCCTTCATAAAGCTGCTCAGTTGCCTTTGAAAGGGAAGGCAGATAAGAATCAGGTGCGGCCTTTGCAAATGGCACCGCAAAGAGCTGCCTGTGATGATGGCAGGTGTCTGCAGCATAAAACGAGAGCAGTTCTTCAGGATGTCACCAATATTTTCTGCGAACCTTCGTATCGGAAATGCTTCGTTGCATCTAAAATCGAGGCTAAGAATTGTAAGCTAAGCAACAAATGTCCAAAAAAGGATTCCAAAGCTGTCCCAGAAGGTGGTTCGAAAAAGCACGAAGTTCAATTCGATCCTAAAATACAGAGAGCACAAAAAAAAGTCAAAACAAACTCTCACTTACAAGAACTTGATCATTCGAGTAATTCGATAGACCAAGAGCTGCCTTCTCAATTAGACATGATAAAGAGGTGTACCAATGATAGTGGTCAGCTCGAAATTTGTACTTCTCAAAGTCCTTTGAAATTACAGAGTAATGAAGGTAAAGGAGCAACTCTTAGGACAATATCATGCCACCCAGGCATTTTAGATATTGATTCTGACAATAGGGATCCTCGAATGTGCAGCCTTTATGCCCCTGATATCTATCACAATTTACTTGCTGCCGAGCTTGTTAGAAGACCACATTCTGATTTCATGGTGATAATCCAACAAGATATTACTCAAAGCATGCGTAATATTTTGGTTGATTGGGTTGTGGAGGTATGCGAAGAGTACAAGTTAGTACCAGACACACTTTACCTAGCTGTTCACATGGTTGATTGGTTTCTATCTCGAAATTACATCGAAAGACAACAACTTCAACTGTTGGGTATAACTTGTATGCTCATTGCTTCGAAGTACGAAGAAGTTTGTGCCCCACGGGTCGAAGAGTTTTGCTTCATCACTGATAACACCTACACAAAGTCTGAGGTATTGAGAATGGAAGGTCAAGTATTAAATTTTTTTGGCTTTCAACTTTCTGTACCAACCACAAAAACATTTCTTAGGAGGTTTCTTCGAGCTGCACAAGCCTCGTATGAGGTAAGGCTGTTCTGTCGATTTTTTCGGTTACGTATGTATATCGTTGATACATGTGTGGAATATATGCAGATGCCAAGTTATGAGCTGGAGTTCTTAGCAGATTATCTAGCAGAATTATCGTTAATGGACCAGATTTTCTTGAATTTCCTTCCTTCGATTATTGCTGCCTCGGCTTTATTTCTTTCCAAATGGACATTAGATCAGAAAAGCCATCCATGGAATCCGACATTAGAGCATTATACATCTTACAAGGCCTCAGACTTGAAAGCCACAGTTTTTTCCTTGCAAGATCTACAGCTGAATACCAAAGGTTGTCTCCTAAGCGCTGTGCGATCCAAGTATCGGCAAGAACGGTTTAAGACGGTTGCGGCTTTATCTTCGCCGAAACTGCTTGAAACTCTGTTTTGA 1506 40.9 MKSEENLITGIVKEPSGRITRARAAALHKAAQLPLKGKADKNQVRPLQMAPQRAACDDGRCLQHKTRAVLQDVTNIFCEPSYRKCFVASKIEAKNCKLSNKCPKKDSKAVPEGGSKKHEVQFDPKIQRAQKKVKTNSHLQELDHSSNSIDQELPSQLDMIKRCTNDSGQLEICTSQSPLKLQSNEGKGATLRTISCHPGILDIDSDNRDPRMCSLYAPDIYHNLLAAELVRRPHSDFMVIIQQDITQSMRNILVDWVVEVCEEYKLVPDTLYLAVHMVDWFLSRNYIERQQLQLLGITCMLIASKYEEVCAPRVEEFCFITDNTYTKSEVLRMEGQVLNFFGFQLSVPTTKTFLRRFLRAAQASYEVRLFCRFFRLRMYIVDTCVEYMQMPSYELEFLADYLAELSLMDQIFLNFLPSIIAASALFLSKWTLDQKSHPWNPTLEHYTSYKASDLKATVFSLQDLQLNTKGCLLSAVRSKYRQERFKTVAALSSPKLLETLF 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17641425 17644895 - Bpe020202.1 Bpe06g00715 105653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00715 501 Pfam Cyclin, C-terminal domain 348 493 IPR004367 -
Bpe06g00715 501 PANTHER CYCLINS 390 501 IPR039361 -
Bpe06g00715 501 PANTHER CYCLINS 46 368 IPR039361 -
Bpe06g00715 501 CDD CYCLIN 346 461 IPR013763 -
Bpe06g00715 501 SMART cyclin_7 255 339 IPR013763 -
Bpe06g00715 501 SMART cyclin_7 378 463 IPR013763 -
Bpe06g00715 501 Pfam Cyclin, N-terminal domain 219 345 IPR006671 -
Bpe06g00715 501 PIRSF Cyclin_A_B_D_E 18 500 IPR039361 -
Bpe06g00715 501 Gene3D - 233 346 - -
Bpe06g00715 501 PANTHER CYCLIN-A2-4 390 501 - -
Bpe06g00715 501 PANTHER CYCLIN-A2-4 46 368 - -
Bpe06g00715 501 SUPERFAMILY Cyclin-like 349 497 IPR036915 -
Bpe06g00715 501 SMART Cyclin_C_2 348 494 IPR004367 -
Bpe06g00715 501 CDD CYCLIN 249 334 IPR013763 -
Bpe06g00715 501 Gene3D - 219 490 - -
Bpe06g00715 501 SUPERFAMILY Cyclin-like 208 345 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00582 Bpe-Chr2:3771515 Bpe06g00715 Bpe-Chr6:17641425 8.30E-111 dispersed
Bpe06g00715 Bpe-Chr6:17641425 Bpe14g00392 Bpe-Chr14:3677387 2.95E-86 dispersed
Bpe06g00715 Bpe-Chr6:17641425 Bpe04g00043 Bpe-Chr4:416855 4.40E-141 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00715 K06627 - pvy:116118139 506.523