Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00730 ATGGATTTCTGGCCGGAGTTTCTCGCAAGCAGCTGGGGAAAAGAGTTTGTGGCAGGTGGGTTCGGAGGCACTGCCGGCGTAATCTCAGGATATCCACTCGACACTCTTCGCATCCGGCAACAGCACTCTAATTCGGCGTCGGCTTTCAGGATTCTTCGCGATGTCGTCGCCGTCGACGGACCTTCTGGCCTCTACAGAGGCATGGCTGCCCCTTTAGCCTCCGTCACTTTTCAGAATGCAATGGTGTTTCAGATCTATGCAATTCTTTCCAGAGCGTTTGATTCATCTGTTTCTTTCAAAGAACCTCCTTCGTACAAGGGAGTAGCTTTAGGAGGTCTCGGCACCGGCGCTATACAGAGCCTTCTGCTCACGCCAGTGGAGTTAGTAAAGATTCGTCTGCAATTACAGAACACAAGATATGCAACACTTCATCAATCAATCTCTCACACAGGCCCTGTAAGCGTAGCTAAAAGCATATACAGAACAGAGGGGTTAAAAGGAATGTACAGAGGTCTAGCCATTACTATGCTCAGAGATGCGCCCTCCCATGGCTTCTATTTCTGGACATACGAGTACGTCCGGGAGCTGCTTCATCCAGGTTGCAGACAGAGTGGGAAAGAGAGCTTGAGGACGATGCTGGCGGCCGGTGGGTTGGCCGGAGTTGCTAGCTGGGTATGCTGTTACCCGCTCGATGTTGTGAAAACAAGGCTTCAAGCTCAATCGCAGGTAGACAAAAAATACAATGGGATTATCGACTGCTTTAGAAGAAGTGTTGGAGAAGATGGATATGGAGTTCTTTGGAGAGGATTAGGAACCGCTGTGGCAAGAGCTTTTCTGGTCAATGGGGCTGTTTTTTCTGCCTATGAAATAACTCTCAGATGCTTATTTGACAATGGAAGTAATCAGGAACAGAACCCCATTGAAGAACAATTTGTAATTGCCCACTCAGATTCAACTTGCAAGCATTAA 969 48.3 MDFWPEFLASSWGKEFVAGGFGGTAGVISGYPLDTLRIRQQHSNSASAFRILRDVVAVDGPSGLYRGMAAPLASVTFQNAMVFQIYAILSRAFDSSVSFKEPPSYKGVALGGLGTGAIQSLLLTPVELVKIRLQLQNTRYATLHQSISHTGPVSVAKSIYRTEGLKGMYRGLAITMLRDAPSHGFYFWTYEYVRELLHPGCRQSGKESLRTMLAAGGLAGVASWVCCYPLDVVKTRLQAQSQVDKKYNGIIDCFRRSVGEDGYGVLWRGLGTAVARAFLVNGAVFSAYEITLRCLFDNGSNQEQNPIEEQFVIAHSDSTCKH 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17760898 17761935 + Bpe020216.2 Bpe06g00730 105668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00730 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Bpe06g00730 322 Gene3D Mitochondrial carrier domain 13 312 IPR023395 -
Bpe06g00730 322 Pfam Mitochondrial carrier protein 211 298 IPR018108 -
Bpe06g00730 322 Pfam Mitochondrial carrier protein 11 93 IPR018108 -
Bpe06g00730 322 Pfam Mitochondrial carrier protein 110 198 IPR018108 -
Bpe06g00730 322 SUPERFAMILY Mitochondrial carrier 11 289 IPR023395 -
Bpe06g00730 322 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Bpe06g00730 322 PRINTS Mitochondrial carrier protein signature 169 187 IPR002067 GO:0055085
Bpe06g00730 322 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Bpe06g00730 322 PRINTS Mitochondrial carrier protein signature 216 238 IPR002067 GO:0055085
Bpe06g00730 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 196 IPR018108 -
Bpe06g00730 322 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Bpe06g00730 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 294 IPR018108 -
Bpe06g00730 322 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01912 Bpe-Chr4:24085266 Bpe06g00730 Bpe-Chr6:17760898 3.96E-08 dispersed
Bpe05g00531 Bpe-Chr5:19489721 Bpe06g00730 Bpe-Chr6:17760898 1.36E-51 dispersed
Bpe06g00730 Bpe-Chr6:17760898 Bpe11g01704 Bpe-Chr11:13324292 1.15E-10 dispersed
Bpe06g00730 Bpe-Chr6:17760898 Bpe07g00209 Bpe-Chr7:1460555 1.73E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00730 K15109 - tcc:18595924 486.878