Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00821 ATGGAACCTATTGATGAGAAAGTTGACCTTGAATCCGACGACGAGATCCCCTTGAGCTCATCACCGACCAGGAGGAAGCTGTCTCCTTTTCATTTGGATACTACCCAATTGCGCTCCTGTGCAGATGTGATCAATTCATGGAATTCTAAGCCTATGCGGTTACGATCACTGAAGAGTATTTACTTTGTCTTGTTTAAAGCAAAAATCAACGCGTTGCTTCCTTTTGGTCCTCTTGCTATATTGCTCCATTATTTGACTGGGAAACATGGATGGGTCTTCTTCTTCACTTTAGTGGGCATCATACCTTTGGCCGAGCGACTTGGCTATGCAACCGAACAGCTCTCATCTTATACTGGACCTACAGTTGGGGGTCTTTTAAATGCAACATTTGGAAATGCAACAGAATTGATCATTGCTTTCTATGCATTAAAGAAAGGGATGATTAGGGTTGTTCAGCAATCTTTGTTGGGATCAATCTTGTCAAATATGCTTTTGGTGCTTGGTTGTGCTTTCTTCATCGGTGGAGTTCATTGCAAGAAGATCCAGGTTTTCAATAAGGCAGCTGCAATCGTGAACTCCGGATTGCTGTTGATGGCTGTCATGGGTATATTGCTTCCCGCCGTGCTTCATTTCACGCATACAGAGGTGCATTTTGGGGAGTCAGAATTAGCTCTGTCAAGATTTAGTAGCTTTGTCATGCTAATAGCATATGCCAGCTACCTTTTCTTTCAATTCAAAAGCCAACGCAACCATTATGGTCCAATTGAGGCGGAAAGAGAGATTGGTTCAAGTTCACATGAAGAGGAAGCTCCTGAGATAACTAGTTGGGAAGCAATTGGGTGGCTTGCTATTTTGACTGTCTGGGTATCTGTCTTATCCGGATACTTCGTTGATGCCATCAAGGGCGCATCTGAGTCATTAAACGTCCCAGTGTCTTTCATCAGTGTCATTTTGCTTCCACTTGTTGGAAATGCGGCAGAACATGCAAGTGCCATCATGTTTGCTGTTAAAGATAAGCTTGATATTAGCCTTGGAGTTGCAATCGGATCGTCAACGCAAATATCAATGTTTGTTATTCCTTTCTGTGTGGTTGTCGGGTGGTTCATGGGCATACCGATGGACTTAAATTTTCAACTTTTTGAGACTGCCACTCTGTTTATCGCTGTGATTGTAGTTGCGTTTATGCTACAGGAAGGTGCATCAAGCTATTTCAAGGGATTGATGCTTATCCTGTGCTATGTAATAGTAGGCGCCAGTTTTTTCTTCCACGTTGACCCTTCGAGCGGTGAG 1290 43.26 MEPIDEKVDLESDDEIPLSSSPTRRKLSPFHLDTTQLRSCADVINSWNSKPMRLRSLKSIYFVLFKAKINALLPFGPLAILLHYLTGKHGWVFFFTLVGIIPLAERLGYATEQLSSYTGPTVGGLLNATFGNATELIIAFYALKKGMIRVVQQSLLGSILSNMLLVLGCAFFIGGVHCKKIQVFNKAAAIVNSGLLLMAVMGILLPAVLHFTHTEVHFGESELALSRFSSFVMLIAYASYLFFQFKSQRNHYGPIEAEREIGSSSHEEEAPEITSWEAIGWLAILTVWVSVLSGYFVDAIKGASESLNVPVSFISVILLPLVGNAAEHASAIMFAVKDKLDISLGVAIGSSTQISMFVIPFCVVVGWFMGIPMDLNFQLFETATLFIAVIVVAFMLQEGASSYFKGLMLILCYVIVGASFFFHVDPSSGE 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18357775 18360586 - Bpe025981 Bpe06g00821 105759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00821 430 TIGRFAM cax: calcium/proton exchanger 72 421 IPR004798 GO:0006816|GO:0015369
Bpe06g00821 430 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 428 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bpe06g00821 430 PANTHER VACUOLAR CATION/PROTON EXCHANGER 1 428 - -
Bpe06g00821 430 Gene3D - 261 420 IPR044880 -
Bpe06g00821 430 Gene3D - 120 259 IPR044880 -
Bpe06g00821 430 TIGRFAM caca2: calcium/proton exchanger 63 421 - -
Bpe06g00821 430 MobiDBLite consensus disorder prediction 1 22 - -
Bpe06g00821 430 Pfam Sodium/calcium exchanger protein 91 245 IPR004837 GO:0016021|GO:0055085
Bpe06g00821 430 Pfam Sodium/calcium exchanger protein 279 416 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00821 Bpe-Chr6:18357775 Bpe14g00769 Bpe-Chr14:5875539 0 dispersed
Bpe06g00821 Bpe-Chr6:18357775 Bpe07g00693 Bpe-Chr7:13556618 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00821 K07300 - fve:101299212 654.44