Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00825 ATGCCTTCTGTGTACGGTGCTCGTTTGACCACCTTTGAAGACTCTGAGAAGGAACGGGAGTATGGATATGTCCGCAAGGTGTCAGGCCCCGTTGTGGTTGCAGATGGCATGGCAGGTGCCGCCATGTATGAATTGGTTCGAGTTGGTCACGATAATCTGATTGGTGAAATTATTCGACTGGAAGGAGATTCTGCTACTATCCAAGTTTACGAGGAAACAGCTGGGTTGATGGTGAATGACCCGGTTCTGCGGACACACAAGCCTTTGTCGGTGGAATTGGGACCTGGAATACTGGGAAACATATTTGATGGAATTCAGAGACCTCTTAAAACTATTGCGAAAAGATCTGGTGATGTCTACATACCTCGTGGTGTATCAGTGCCAGCACTTGACAAAGATATTCTTTGGGATTTTCAGCCAAAAAAACTGGGTGAAGGTGATCTTTTGACTGGTGGAGACTTGTATGCTACTGTCTTTGAGAATAGTTTAATGCAGCACCATATTGCGCTTCCTCCTAATTCAATGGGAAAAATTACTTACATTGCTCCAGAGGGTCAATATTCATTGAAGGATACAGTGTTGGAGCTGGAGTTTCAAGGTGTTAAAAAGCAATTTACCATGCTTCAGACATGGCCTGTACGTACACCTAGGCCGGTTGCATCAAAACTTGCTGCTGATACCCCTCTACTTACTGGTCAGCGTGTTCTTGATGCGCTTTTTCCTTCTGTTCTTGGTGGAACTTGTGCCATACCTGGAGCATTTGGTTGTGGAAAAACTGTCATTAGTCAGGCTCTTTCTAAGTACTCAAATTCCGACACTGTGGTTTATGTTGGTTGTGGAGAGCGAGGAAATGAAATGGCAGAGGTTTTGATGGATTTTCCGCAATTAACAATGACATTGCCTGACGGTCGTGAAGAATCTGTCATGAAACGCACTACTCTTGTGGCCAACACTTCTAACATGCCTGTGGCTGCCCGTGAGGCTTCAATATATACAGGAATCACCATTGCTGAATACTTCAGAGATATGGGATACAATGTGAGTATGATGGCAGATTCTACTTCTCGTTGGGCAGAAGCACTGCGTGAGATATCTGGACGACTGGCAGAAATGCCTGCAGATAGTGGATATCCTGCTTATCTTGCGGCACGTCTAGCTTCTTTCTACGAGCGTGCGGGAAAAGTAAAATGTCTTGGAGGACCTGAACGTAATGGTAGTGTTACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTTTCTGATCCTGTTACTTCTGCTACCCTCAGTATTGTACAGGTTTTCTGGGGACTAGACAAAAAGCTTGCTCAAAGAAAACACTTCCCATCTGTAAACTGGCTTATTTCTTACTCAAAATACTCAACTGCATTGGAATCCTTCTACGAGCAGTTTGACCAAGATTTTATTAACATCAGGACAAAGGCTCGTGAGGTGCTACAAAGAGAAGATGACCTTAATGAGATTGTTCAACTTGTTGGAAAAGATGCATTAGCTGAAGGAGATAAAATTACCCTCGAAACTGCAAAACTTCTGAGAGAAGACTATCTAGCTCAGAATGCATTCACTCCATATGATAAATTCTGCCCATTTTATAAGTCCGTTTGGATGATGCGCAACATCATTCATTTCTACAATTTGGCCAATCAGGCTGTAGAGAGAGGAGCTGGTATGGATGGTCAGAAGATAACATACACTCTGATCAAGCACCGATTAGGAGATCATTTTTATCGGCTAGTGTCCCAAAAATTTGAGGACCCAGCGGAAGGAGAAGAAGCGCTTGTTTCAAAATTTAAGAAGCTGCATGAAGACCTGACAAATGGTTTCCGTGCCCTTGAGGATGAAACTCGG 1869 43.71 MPSVYGARLTTFEDSEKEREYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDILWDFQPKKLGEGDLLTGGDLYATVFENSLMQHHIALPPNSMGKITYIAPEGQYSLKDTVLELEFQGVKKQFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDQDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKITYTLIKHRLGDHFYRLVSQKFEDPAEGEEALVSKFKKLHEDLTNGFRALEDETR 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18415371 18428490 - Bpe025984 Bpe06g00825 105763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00825 623 CDD ATP-synt_V_A-type_alpha_C 475 580 - -
Bpe06g00825 623 Hamap V-type ATP synthase alpha chain [atpA]. 19 622 IPR022878 GO:0046034|GO:0046961
Bpe06g00825 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 462 IPR027417 -
Bpe06g00825 623 Gene3D - 91 457 IPR027417 -
Bpe06g00825 623 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 17 89 IPR036121 GO:0046034|GO:1902600
Bpe06g00825 623 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 3 622 IPR022878 GO:0046034|GO:0046961
Bpe06g00825 623 Pfam ATPsynthase alpha/beta subunit N-term extension 102 223 IPR031686 -
Bpe06g00825 623 Gene3D - 134 205 - -
Bpe06g00825 623 Pfam ATP synthase alpha/beta family, beta-barrel domain 25 85 IPR004100 GO:0046034|GO:1902600
Bpe06g00825 623 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 3 622 - -
Bpe06g00825 623 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 232 458 IPR000194 GO:0005524
Bpe06g00825 623 TIGRFAM V-ATPase_V1_A: V-type ATPase, A subunit 20 611 IPR005725 GO:0033180|GO:0046961|GO:1902600
Bpe06g00825 623 ProSitePatterns ATP synthase alpha and beta subunits signature. 449 458 IPR020003 GO:0005524
Bpe06g00825 623 Gene3D - 20 89 IPR023366 -
Bpe06g00825 623 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 471 553 - -
Bpe06g00825 623 CDD ATP-synt_V_A-type_alpha_N 21 87 - -
Bpe06g00825 623 CDD V_A-ATPase_A 88 460 - -
Bpe06g00825 623 Gene3D - 459 621 IPR024034 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00825 Bpe-Chr6:18415371 Bpe13g01042 Bpe-Chr13:16087843 1.38E-26 dispersed
Bpe10g00735 Bpe-Chr10:13659618 Bpe06g00825 Bpe-Chr6:18415371 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00825 K02145 - twl:119990362 1192.95