Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00038 ATGCTTCAAAACAAGTTTTATCAGGCATTTGCAGCACTTGCTAGTTGCAACATGGTTTTGGCTATTGCTGCATCTGCATTATGTGCCTACATTGCACCTGCAGCTGCAGGCTCTGGCGTTCCAGAAGTGAAAGCATACCTCAATGGGATAGATGCTCATTCCATGTTGGCCCCAACTATCCTCTTTGTAAAGATCTTTGGTTCAGTTTTAGGTGTTGCTGCTGGATTTGTTGTGGGTAAGGAAGGACCGATGGTACATACTGGTGCATGCATAGCTTCTTTACTTGGCCAAGGAGGGTCTCGAAAATACCACTTAACTTGGAAGTGGCTCACATACTTCAACAATGATAGGGATAGGCGGGATTTGATCACCTGTGGTGCTGCTGCTGGAGTAGCAGCTGCCTTCCGTGCCCCAGTTGGTGGAGTTCTCTTTGCCCTTGAAGAAGCTGCTTCATGGTGGAGGAATGCTCTTCTTTGGAGAACCTTCTTTACAACTGCTGTAGTGGCATTTGTGTTAAAAGGTTTCATAGGGTTTTGTCGGGGAGGAAAATGTGGACTTTTTGGCGAGGAAGACCTAGTTATGTATGATGTTAATTCAGAAAAAGTTTTGTACCGTACCCCAGATTTACTGGCTGTGATATTACTAGGAGTTCTCGGTGGTGTCTTTGGAAGCCTTTACAATTATTTTGTCGACAAGGTTCTCCGCACTTACAGCATCGTCAATGAGAGAGGTCCTTCCCTTAAAATCCTACTTGTTGCTGCCATTTCTCTATTGACTTCTTGTTGCTCTTACGGTCTTCCATGGCTCTCCATCTGCATACCTTGCCCTGCTCACTTGGAGGATCAGTGTCCCACCATAGGTCGCACTGGTAATTACAAGAGCTTTCAGTGCCCTCCTAACCATTACAATGATCTTGCCTCGCTTTTCCTGAATACCAATGATGACGCAATTCGCAACCTGCTGAGCTCTGCTTCTGATAAGGAATTTCACCTCTCAACCCTTGCAATTTTCTTTGCTGCCATCTACTTTCTTGGCATTATCACTTATGGAATTGCTATTCCATCTGGCCTCTTCATTCCTGTCTTACTTGCTGGGTCATCTTATGGTCGCCTTGTTGGGACACTTGTTGGGTCTCTATCCAATCTTGATGTGGGTCTCTTTGCTCTCCTCGGAGCTGCATCTTTTCTTGGCGGCACCATGAGAATGACAGTTTCTATATGCATCATCCTTCTTGAACTTACTAATGATCTTTTGATGCTACCATTGGTGATGCTTGTACTTCTAATTTCAAAAACTGTAGCTGATTGTTTTAACAAAGGTGTCTACGACCAAATTGTCAAAATGAAGGGGTTGCCATACGTGGAAGCCCATGCAGAGCCATATATGAGACACTTGGTTGTCAGTGATGTCATGTCTGGTCCGCTGATTACATTTTCTGGAGTAGAAAAGGTTGGAACCTTAATGCATGCTTTGAAGATGACAAAACATAATGGATTCCCTGTTATTGATGAGCCCCCAATATCGGATGCTCCGGAATTGTGTGGACTTGTTCTGAGGTCTCATCTTCTTGTGTTGCTCAAAGGGAAGAATTTCACTAAGCATAAAGGGACTACTGGAGCCGCAATAATGAGTAGATTTACTGCATATGATTTTGCAAAAGCAGGATCAGGTAAAGGGGTGAAGATTGAGGACTTGGATATCAAAGTGGATGAGATGGAGATGTATCTAGATCTCCATCTTATTACAAATACATCCCCTTATACCGTAGTGGAAACAGCGTCTCTTGCTAAAGCAGCTATTCTCTTTCGTGACCTTGCCTTGCGTCACTTATTGGTGGTGCCAAAGAAACAAGGGCGGCCTCCAATTGTCGGAATCCTTACACGACATGACTTAATGCAGGAGCACGTGCTAGGACTTTACCCACATTTCAATACTGATAAGTAA 1944 44.08 MLQNKFYQAFAALASCNMVLAIAASALCAYIAPAAAGSGVPEVKAYLNGIDAHSMLAPTILFVKIFGSVLGVAAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTWKWLTYFNNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRNALLWRTFFTTAVVAFVLKGFIGFCRGGKCGLFGEEDLVMYDVNSEKVLYRTPDLLAVILLGVLGGVFGSLYNYFVDKVLRTYSIVNERGPSLKILLVAAISLLTSCCSYGLPWLSICIPCPAHLEDQCPTIGRTGNYKSFQCPPNHYNDLASLFLNTNDDAIRNLLSSASDKEFHLSTLAIFFAAIYFLGIITYGIAIPSGLFIPVLLAGSSYGRLVGTLVGSLSNLDVGLFALLGAASFLGGTMRMTVSICIILLELTNDLLMLPLVMLVLLISKTVADCFNKGVYDQIVKMKGLPYVEAHAEPYMRHLVVSDVMSGPLITFSGVEKVGTLMHALKMTKHNGFPVIDEPPISDAPELCGLVLRSHLLVLLKGKNFTKHKGTTGAAIMSRFTAYDFAKAGSGKGVKIEDLDIKVDEMEMYLDLHLITNTSPYTVVETASLAKAAILFRDLALRHLLVVPKKQGRPPIVGILTRHDLMQEHVLGLYPHFNTDK 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 328195 331843 + Bpe020852.1 Bpe07g00038 105807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00038 647 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Bpe07g00038 647 PRINTS Plant CLC chloride channel signature 305 321 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe07g00038 647 PRINTS Plant CLC chloride channel signature 149 157 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe07g00038 647 PRINTS Plant CLC chloride channel signature 163 173 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe07g00038 647 PRINTS Plant CLC chloride channel signature 181 188 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe07g00038 647 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 646 - -
Bpe07g00038 647 Pfam CBS domain 467 527 IPR000644 -
Bpe07g00038 647 Pfam CBS domain 583 633 IPR000644 -
Bpe07g00038 647 CDD CBS_pair_voltage-gated_CLC_euk_bac 467 634 - -
Bpe07g00038 647 SUPERFAMILY Clc chloride channel 9 456 IPR014743 -
Bpe07g00038 647 ProSiteProfiles CBS domain profile. 581 645 IPR000644 -
Bpe07g00038 647 Pfam Voltage gated chloride channel 21 435 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe07g00038 647 Gene3D - 455 638 IPR046342 -
Bpe07g00038 647 SMART cbs_1 585 636 IPR000644 -
Bpe07g00038 647 SMART cbs_1 474 527 IPR000644 -
Bpe07g00038 647 PRINTS Chloride channel signature 64 83 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe07g00038 647 PRINTS Chloride channel signature 385 401 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe07g00038 647 PRINTS Chloride channel signature 403 422 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe07g00038 647 PRINTS Chloride channel signature 33 50 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe07g00038 647 PRINTS Chloride channel signature 441 455 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe07g00038 647 PRINTS Chloride channel signature 128 147 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe07g00038 647 PRINTS Chloride channel signature 353 373 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe07g00038 647 Gene3D Clc chloride channel 2 454 - -
Bpe07g00038 647 SUPERFAMILY CBS-domain pair 458 633 IPR046342 -
Bpe07g00038 647 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 1 646 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00038 Bpe-Chr7:328195 Bpe13g01153 Bpe-Chr13:16981922 0 dispersed
Bpe05g00733 Bpe-Chr5:20807724 Bpe07g00038 Bpe-Chr7:328195 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00038 K05016 - jre:108988922 1059.67