Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00043 ATGCCTAGTGGAGAAGAAGGCTCCATTGAAGCCCTCACTTGCTCAGCCTGTAATTGCCATAGAAACTTCCATAGAAAAGAAGTTGAAGGAGAGAATGAGTTTCCTCTCCATAGCCAATACCTTAACACCAATAGGGTTGGAAGAAAATTCATCTTCAACCATCATAAGAACATTATAGCTCCAGAAGCTTTAGCCTATTCTACGGCTACAGGCACGTTTATACCCACCAGAACCTTACCCGTTCCCCCTCATCAGATGATAATGTCCTACCAGATGCCCTCTCTTCCTTCGGAATCAGACGAGCAAGAAGGCGGCAATGGTGGCGGGGGAGGAGCGGCTAGGGCTCCGCAGATGGCGAAGAAGAGATTCAGGACAAAATTCAGTCAAGAACAGAAGGAGAAAATGCTAAACTTTGCAGAAAAAATAGGGTGGAAAATGCAGAAGCAAGAAGAGGGTGTGGTGCAGCAGTTCTGCCAAGAGATTGGAGTGAAGAGGAGAGTCCTCAAAGTTTGGATGCACAACAATAAGCATAATCTAGCCACTAAGAATCCATCCTCTTCTGGTTGA 567 45.86 MPSGEEGSIEALTCSACNCHRNFHRKEVEGENEFPLHSQYLNTNRVGRKFIFNHHKNIIAPEALAYSTATGTFIPTRTLPVPPHQMIMSYQMPSLPSESDEQEGGNGGGGGAARAPQMAKKRFRTKFSQEQKEKMLNFAEKIGWKMQKQEEGVVQQFCQEIGVKRRVLKVWMHNNKHNLATKNPSSSG 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 377369 377935 - Bpe020857.1 Bpe07g00043 105812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00043 188 MobiDBLite consensus disorder prediction 94 122 - -
Bpe07g00043 188 Pfam ZF-HD protein dimerisation region 1 28 IPR006456 -
Bpe07g00043 188 Gene3D - 105 182 - -
Bpe07g00043 188 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4-LIKE 1 184 - -
Bpe07g00043 188 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 184 - -
Bpe07g00043 188 SUPERFAMILY Homeodomain-like 107 179 IPR009057 -
Bpe07g00043 188 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 120 176 IPR006455 -
Bpe07g00043 188 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 1 27 IPR006456 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00043 Bpe-Chr7:377369 Bpe13g00443 Bpe-Chr13:11967088 9.20E-41 dispersed
Bpe07g00043 Bpe-Chr7:377369 Bpe02g01693 Bpe-Chr2:19485985 1.27E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21593 PF04770 ZF-HD_dimer 8.00E-12 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00043 - - zju:107431435 281.182