Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00066 ATGGAGAACTTGATCTCTTTGGTGAATAAAATTCAGAGAGCTTGCACGGCTCTAGGTGATCATGGAGAAGCTAGTGCATTGCCCACACTTTGGGATTCTTTGCCTGCGATTGCCGTTGTCGGTGGTCAGAGCTCAGGCAAGTCTTCAGTATTAGAAAGCATTGTCGGGAAGGACTTCTTACCTCGAGGATCTGGGATTGTTACTCGGCGGCCGCTTGTTTTGCAGCTTCATAAGATTGATGAAGGAAGTAGAGAATATGCTGAGTTCCTTCATCTTCAAAGGAAAAAATTCACTGATTTTGCGGCTGTCAGGAAGGAAATTCAGGACGAAACTGATCGAGAGACTGGCCGGTCTAAACAAATCTCCAGTGTTCCAATTCATCTCAGTATATATTCTCCAAATGGTAGGGTTAATTTCATATTGTATGATTGTATAGTTTTTCTTGTACATTCTCTAATTTTTATATTGTTCTTCAAATTTTTGGCAGTTGTCAACCTAACGCTCATTGATCTTCCCGGTCTCACAAAAGTTGCTGTTGATGGACAATCGGAAAGTATTGTGATGGACATTGAGAATATGGTTCGCTCCTTTATTGAGAAGCCCAATTGTATTATTCTTGCTATATCACCAGCCAATCAAGATCTTGCTACATCAGATGCTATTAAAATCTCCCGTGAAGTTGATCCTACAGGGGAAAGGACATTTGGTGTCTTGACGAAGATTGATCTCATGGATAAGGGTACTGATGCAGTTGATATATTAGAAGGAAAATCTTATCGGCTAAAATTTCCATGGGTTGGTGTTGTTAACCGCTCACAAGCGGATATTAACAAGAATGTCGATATGATTGCTGCTCGACGTAGAGAGCGTGAATATTTTGCAACTACCCCAGAATACAAGCACCTTTCTAATAGAATGGGTTCCGAGCATCTAGCAAAGATGCTTTCAAAGCATCTAGAAACGGTGATCAAGTCCCGTATCCCTGGCATCCAAAGCCTTATCAACAAAACCATCGCTGAACTTGAAGCTGAACTGAGTCGTCTTGGAAAGCCCGTGGCTACCGATGCTGGAGGAAAACTGTATATGATTATGGAGATTTGTCGAATTTTTGATCAGAACTACAAAGAGCATCTTGATGGAGTCCGACCTGGAGGTGATAAAATTTACCACGTCTTTGATAATCAACTTCCTGCTGCTCTAAAAAGATTGCAGTTTGACAAGCAACTTTCGATGGAAAATATAAAGAAGCTCATCACCGAAGCTGATGGATATCAGCCACATCTAATAGCTCCTGAGCAAGGATACCGTCGCCTCATCGAATCTACTTTAATAACCATAAGAGGCCCTGCTGAGGCAGCTGTTGATGCGGTTCATGGATTGTTGAAGGATTTGGTTCACAAGGCTATCAAGGAGACTATAGAGTTGAAGCAATATCCTGGTCTTAGAACGGAGGTAGGAAATGCAGCCATTGAATCTCTCGACAGAATGAGGGATCAAAGCAAGAAGGCAACCCTCCAACTAGTTGACATGGAATGCAGTTACTTGACAGTGGATTTCTTCCGAAAGCTTCCTCAGGATGTTGAGAAGGGTGGCAACCCCACCCACTCAATTTTTGACAGATACAATGATTCGTATCTCCGACGCATTGGAACAACGGTTTTGTCGTATGTAAATATGGTGTGTGCAAGTTTACGCAACTCCATTCCGAAGTCCATCGTTTATTGTCAAGTGCGAGAAGCTAAACGAAGCCTGCTCGATCATTTCTTCACTGAATTGGGTAAATTAGAGCAAAAGCGACTGTCGTCTCTATTGAACGAGGACCCAGCAGTGATGGAGCGGCGAACAGCCCTCGCAAAGAGGCTGGAGCTGTACAGGAGTGCGCAATCAGAAATCGATACGGTTGCTTGGTCTAAGTAG 1917 42.98 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKIDEGSREYAEFLHLQRKKFTDFAAVRKEIQDETDRETGRSKQISSVPIHLSIYSPNGRVNFILYDCIVFLVHSLIFILFFKFLAVVNLTLIDLPGLTKVAVDGQSESIVMDIENMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPTGERTFGVLTKIDLMDKGTDAVDILEGKSYRLKFPWVGVVNRSQADINKNVDMIAARRREREYFATTPEYKHLSNRMGSEHLAKMLSKHLETVIKSRIPGIQSLINKTIAELEAELSRLGKPVATDAGGKLYMIMEICRIFDQNYKEHLDGVRPGGDKIYHVFDNQLPAALKRLQFDKQLSMENIKKLITEADGYQPHLIAPEQGYRRLIESTLITIRGPAEAAVDAVHGLLKDLVHKAIKETIELKQYPGLRTEVGNAAIESLDRMRDQSKKATLQLVDMECSYLTVDFFRKLPQDVEKGGNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTELGKLEQKRLSSLLNEDPAVMERRTALAKRLELYRSAQSEIDTVAWSK 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 501488 506123 - Bpe020878.1 Bpe07g00066 105835

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00066 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 337 IPR027417 -
Bpe07g00066 638 PANTHER DYNAMIN-LIKE PROTEIN 1E 162 637 - -
Bpe07g00066 638 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 143 - -
Bpe07g00066 638 SMART dynamin_3 1 279 IPR001401 GO:0003924|GO:0005525
Bpe07g00066 638 PRINTS Dynamin signature 229 245 IPR022812 -
Bpe07g00066 638 PRINTS Dynamin signature 34 52 IPR022812 -
Bpe07g00066 638 PRINTS Dynamin signature 160 177 IPR022812 -
Bpe07g00066 638 PRINTS Dynamin signature 59 76 IPR022812 -
Bpe07g00066 638 PRINTS Dynamin signature 210 228 IPR022812 -
Bpe07g00066 638 PRINTS Dynamin signature 252 271 IPR022812 -
Bpe07g00066 638 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 328 IPR030381 GO:0005525
Bpe07g00066 638 Pfam Dynamin GTPase effector domain 542 634 IPR003130 GO:0003924|GO:0005525
Bpe07g00066 638 Gene3D Dynamin, middle domain 359 614 - -
Bpe07g00066 638 SMART GED_2 541 634 IPR003130 GO:0003924|GO:0005525
Bpe07g00066 638 ProSiteProfiles GED domain profile. 546 638 IPR020850 -
Bpe07g00066 638 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Bpe07g00066 638 Gene3D - 1 337 IPR027417 -
Bpe07g00066 638 CDD DLP_1 33 328 IPR001401 GO:0003924|GO:0005525
Bpe07g00066 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 144 IPR027417 -
Bpe07g00066 638 Pfam Dynamin central region 249 516 IPR000375 -
Bpe07g00066 638 PANTHER DYNAMIN 162 637 IPR022812 -
Bpe07g00066 638 PANTHER DYNAMIN 2 143 IPR022812 -
Bpe07g00066 638 Pfam Dynamin family 37 241 IPR045063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00066 - - - jre:108993767 1111.67
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe05g00697 Bpe07g00066 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00066 Bpe-Chr7:501488 Bpe13g00885 Bpe-Chr13:14955188 0 dispersed
Bpe05g00697 Bpe-Chr5:20589179 Bpe07g00066 Bpe-Chr7:501488 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g146 . . Bda06g00152 Bda08g00462 Bpe05g00697 Bpe07g00066 . . . . . . . . . Cpe14g00456 . . . . . . . . Cla07g01094 . Cec07g1258 Cco07g1235 . . Cre07g1519 . . Cone6ag0857 Cone9ag0859 . . . Cme07g01570 . . . . . . Bma05g00879 Bma12g00613 . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00667 Chy07g01144 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000261 5 7 3 6 5 5 6 5 5 5 4 4 4 6 5 6 4 8 5 5 5 5 5 5 5 4 4 8 5 5 154
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00066 Bpe_Chr07 FPKM 8.092105 10.21754 2.073592 3.706198 14.961238 11.960014 20.354815 1.493134 2.611022 1.694126