Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00105 ATGTCAGAATCCCAGATTTCTGCCCAGCTCCTAGTTTTGGATTTATCAGAACCGATCAACCCGGCCGTACTATCTTCTCTCGCAGAAGCCTGCGAAGAATGGGGTTTCTTCTACGTCACCAACCATGGCGTCTCTGAAAATCTCTTCGCCAAACTTTTTTCATTCTACAGGAAAATCTTCAGCCTTTCGCTGGATTCTAAGCTTAAGCTCGGCCCTTCTTCCCATCGCAAAACCTACACTCCACCCTTCATAGCATCTCCTTACTTCGAAAGCCTGCTGGTTTCTGGACCAGATTTCTTCGCCTCCGCCGAGAGTTCCATCGCCGAACTCTTTGGCCACCACAGTTCTGAAATCAGTGAGTTTTTGCAAGAATACGGGAGCAAGATGGTAGAATTATCGAAGAGAATTGTTTCGGCTGTGTTGATGAGCTTAGGAGAATGTTACGAAAGGAAGTTTTACGAGTCTGAGTTCAGTAAATGCCATGGCTATTTGAGGATAGTGAACTACGCAGAAGTGGAGAAAGACGAAGAAGAAGAAGAAGAGGAAATGGAAGGGCTTGGAATGCACACTGATATGAGCTGTCTGACCATAGTCTACCAAGATGAAGTAGGTGGGCTTCAAATGAGATCAAAGGGTGGAAAATGGATGGATATCAAACCATGTGAGAAATGCTTGGTTGTTAACGTAGGCGATCTGATGCAGGCGTGGACAAACGGACGGTTTAGATCGTCCGAACACCGAGTCATTTTGAAGAATCGAGCGGTGAATCGTCGATCGTTGGCTTTCTTTTGGTGCTTTGAGGACGAGAAGGTGATCTCGGCCCCGGACAAATTGGTGGGGGAAGATAAGTCGAGAATTTACGCGCCGTTTGTTTGTTCGGATTATCTCAAGTTTAGAGAAAGCAATGAAGTAGGTAAATTCGATAGAATTGGGTACACGGTCAATGATTTTGCACTAATTCAAATTGTAGACGATGATCAA 981 45.16 MSESQISAQLLVLDLSEPINPAVLSSLAEACEEWGFFYVTNHGVSENLFAKLFSFYRKIFSLSLDSKLKLGPSSHRKTYTPPFIASPYFESLLVSGPDFFASAESSIAELFGHHSSEISEFLQEYGSKMVELSKRIVSAVLMSLGECYERKFYESEFSKCHGYLRIVNYAEVEKDEEEEEEEMEGLGMHTDMSCLTIVYQDEVGGLQMRSKGGKWMDIKPCEKCLVVNVGDLMQAWTNGRFRSSEHRVILKNRAVNRRSLAFFWCFEDEKVISAPDKLVGEDKSRIYAPFVCSDYLKFRESNEVGKFDRIGYTVNDFALIQIVDDDQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 746844 747928 - Bpe026039 Bpe07g00105 105874

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00105 327 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 267 IPR005123 -
Bpe07g00105 327 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 82 IPR026992 -
Bpe07g00105 327 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 2 318 - -
Bpe07g00105 327 Gene3D - 1 298 IPR027443 -
Bpe07g00105 327 Pfam 2OG-Fe(II) oxygenase superfamily 165 265 IPR044861 -
Bpe07g00105 327 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 318 - -
Bpe07g00105 327 SUPERFAMILY Clavaminate synthase-like 8 302 - -
Bpe07g00105 327 PRINTS Isopenicillin N synthase signature 27 44 - -
Bpe07g00105 327 PRINTS Isopenicillin N synthase signature 225 251 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00105 - - - vvi:109121740 453.366
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00105 Bpe-Chr7:746844 Bpe14g00980 Bpe-Chr14:7242638 2.86E-138 dispersed
Bpe07g00105 Bpe-Chr7:746844 Bpe06g00712 Bpe-Chr6:17624527 5.91E-34 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g316 . . . . . Bpe07g00105 . . . . . . . . . . . Bhi11g00395 . . . . . . . . . . . . . . . . Cone9ag0787 Lsi07g01416 Csa05g00148 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006886 2 1 1 1 2 1 1 1 1 2 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 3 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00105 Bpe_Chr07 FPKM 1.058058 1.311821 1.015185 0.594031 0.0 0.22648 0.0 0.0 0.0 0.0