Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00121 ATGGCTTCCTCCGAGGCCATCGTGGATTCTACGCCGTTGCTGGCGAATCATGGCAGGCCTTCTAGTGAAACGAATTCCAGTCGTCGATTTGTTCAGAGGCAGAGCCTGCGTCAGGCGGCGAGGTTTTTGAGGCAAACGAGCAGTCGGGGGATGATGCGCGAGTCTTCGTTGCGAGTGAGAGAGGCTGCAGCGGAGCAATTTGAGGAGAGGCAGAGCGATTGGGCGTATTCGAAACCGGTTGTGATTCTAGATATTGTTTGGAATTTCGCGTTTGTGGTTGTAGCTGCTACAATGCTGGTTATGAGCAGGGCTGAGTCGCCGGATGTGCCCTTGAGACTGTGGCTGGTAGGATATGGTTTTCAATGCGTTCTTCATATGGTGTGTGTTTGCTTCGAATATAGACGTCGTAGACACCGGCTCCCTACGCAGATGGTTAATTCAGTTGAAGGGGAAAGCGGAGCTGCTGAGCAATCAGGCTCTGGATCGAGAGAGGATTCACGGCCGTACTTAACTCTGGGGCAGTTAAACGATGTGGATACAAGTATTTCTAAGCATCTCGAATCGGCAAATACAATGTTTTCGTTTATCTGGTGGATTATTGGGTTCTATTGGGTATCAGCAGGAGGTCAAGGTTTGGCACATGCCTCTCCTCAGCTTTACTGGTTGTGCATAATTTTCTTAGGTTTTGATGTCTTCTTTGTCGTTTTTTGTGTTGCTTTGGCGTGTGTAATCGGAATTGCTGTTTGTTGCTGTCTTCCATGTATCATTGCACTTCTATATGCTGTGGCTGACCAGGAAGGAGCATCCAGAGAAGACATTGAACAGTTGTCTAAATTCAAATTCAGAAAATGTGGAGATTCAGATAAGCTATCCAGCGATGGACACGAACCTTCGGGGGGAATAATGACAGAATGCGGGACAGATTCACCCATTGAACATGTTCTCTCACACGAAGATGCTGAATGCTGCATCTGCATTTCTGCTTATGAGGATGGAGTTGAGCTGAGGGAGCTTCCTTGTGGCCACCATTTTCACTGTCCATGCGTAGATAAATGGCTACACATTAATGCTACTTGTCCTCTCTGTAAATACAACATTTTGAAGTTTAGTAACCATGGACAAGACGAAGTTTAG 1134 46.91 MASSEAIVDSTPLLANHGRPSSETNSSRRFVQRQSLRQAARFLRQTSSRGMMRESSLRVREAAAEQFEERQSDWAYSKPVVILDIVWNFAFVVVAATMLVMSRAESPDVPLRLWLVGYGFQCVLHMVCVCFEYRRRRHRLPTQMVNSVEGESGAAEQSGSGSREDSRPYLTLGQLNDVDTSISKHLESANTMFSFIWWIIGFYWVSAGGQGLAHASPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIALLYAVADQEGASREDIEQLSKFKFRKCGDSDKLSSDGHEPSGGIMTECGTDSPIEHVLSHEDAECCICISAYEDGVELRELPCGHHFHCPCVDKWLHINATCPLCKYNILKFSNHGQDEV 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 869422 871816 - Bpe020933.1 Bpe07g00121 105890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00121 377 CDD RING-H2_RNF111_like 321 365 - -
Bpe07g00121 377 Pfam Ring finger domain 321 363 IPR001841 -
Bpe07g00121 377 PANTHER TARGET OF ERK KINASE MPK-1 2 377 - -
Bpe07g00121 377 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 306 371 IPR013083 -
Bpe07g00121 377 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 377 - -
Bpe07g00121 377 MobiDBLite consensus disorder prediction 1 32 - -
Bpe07g00121 377 SUPERFAMILY RING/U-box 312 369 - -
Bpe07g00121 377 SMART ring_2 322 362 IPR001841 -
Bpe07g00121 377 ProSiteProfiles Zinc finger RING-type profile. 322 363 IPR001841 -
Bpe07g00121 377 MobiDBLite consensus disorder prediction 147 168 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01228 Bpe-Chr2:15913249 Bpe07g00121 Bpe-Chr7:869422 3.97E-50 dispersed
Bpe07g00121 Bpe-Chr7:869422 Bpe14g01000 Bpe-Chr14:7388684 5.94E-150 dispersed
Bpe05g00632 Bpe-Chr5:20199940 Bpe07g00121 Bpe-Chr7:869422 9.16E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00121 - - csv:101209228 552.747