Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00128 ACCATGGCGTCGAGTTCTTCTTCGAGAAAACACTCTCTTTACAGAGGCATTCGTTGTAGAAGCGGGAAATGGGTGTCGGAAATCCGAGAGCCACGTAAAACGAATCGAATTTGGCTCGGGACGTTCCCCTCCCCTGAAATGGCGGCTGCCGCACACGATGTTGCTGCCTTAGCGCTCAGAGGAAACGACGCCACTCTTAACTTCCCGGCGCTGGTTGGTTCTTATCCTGTTCCAGCTTCTACCTCACCGGCCGATATCAGAGCTGCCGCCTTAGCTGCCGCGACGCTGATGAAAATGAGTTCGAAGGATGATGATCGGTCAGAGGAGCAGTTTAGCAAACTGAGCGATGAATTTCTGGACGAGGAGGAGATTTTCGACATGCCCAATTTGCTAGTGGACATGGCGGGAGGAATGTTAATGTCGCCGCCGAGAATGAACTTCCCGCCGGACCACGAGCCGGCTGGTTTTTCCGATGGACTAGAGCGTTTATGGAGTCATTTTTGA 504 52.78 TMASSSSSRKHSLYRGIRCRSGKWVSEIREPRKTNRIWLGTFPSPEMAAAAHDVAALALRGNDATLNFPALVGSYPVPASTSPADIRAAALAAATLMKMSSKDDDRSEEQFSKLSDEFLDEEEIFDMPNLLVDMAGGMLMSPPRMNFPPDHEPAGFSDGLERLWSHF 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 906679 907182 + Bpe020940.1 Bpe07g00128 105897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00128 167 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 167 - -
Bpe07g00128 167 SUPERFAMILY DNA-binding domain 12 70 IPR016177 GO:0003677
Bpe07g00128 167 SMART rav1_2 13 75 IPR001471 GO:0003700|GO:0006355
Bpe07g00128 167 Pfam AP2 domain 13 61 IPR001471 GO:0003700|GO:0006355
Bpe07g00128 167 PANTHER ETHYLENE RESPONSE FACTOR 2 167 - -
Bpe07g00128 167 CDD AP2 12 71 IPR001471 GO:0003700|GO:0006355
Bpe07g00128 167 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Bpe07g00128 167 PRINTS Ethylene responsive element binding protein signature 51 71 IPR001471 GO:0003700|GO:0006355
Bpe07g00128 167 ProSiteProfiles AP2/ERF domain profile. 13 69 IPR001471 GO:0003700|GO:0006355
Bpe07g00128 167 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00664 Bpe-Chr4:4198727 Bpe07g00128 Bpe-Chr7:906679 8.19E-42 dispersed
Bpe07g00128 Bpe-Chr7:906679 Bpe03g00126 Bpe-Chr3:1798623 1.03E-39 dispersed
Bpe12g00412 Bpe-Chr12:9705559 Bpe07g00128 Bpe-Chr7:906679 1.75E-37 wgd
Bpe03g00305 Bpe-Chr3:4389013 Bpe07g00128 Bpe-Chr7:906679 1.11E-43 wgd
Bpe07g00128 Bpe-Chr7:906679 Bpe07g00954 Bpe-Chr7:15344622 2.47E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21600 PF00847 AP2 4.10E-10 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00128 - - jre:108990846 212.231