Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00136 ATGGGGAGGTTGAACTTCTTCTTCGTCTTGCTTATTTTGGCAGTCACGGGAAAATCTATGCTTGTGGGAGCCGTCTTTCAACCAAGCCCTTGGAAACCGGCTCATGCCACTTTTTATGGGGATGAAACGGCCTCTGAGACAATGGGAGGGGCGTGCGGGTACGGAAACTTGTTCGTGAATGGGTATGGAACAGACACGGCTGCATTGAGCTCGACGTTGTTCAATAACGGATATGCATGTGGGACATGTTACCAAATAAAATGTTTTCAAGCAAAGGCATGCTACACCAATGTAGCATACACCACGGTCACGACCACCAACCTTTGCCCACCAAATTGGTCCCAAGACTCTAATGCAGGCGGATGGTGCAACCCTCCTAGAGTTCACTTTGACATGTCCAAACCTGCCTTTATGAAAATCGCTGACTGGAAAGCTGGTATTGTCCCAGTCCTCTATCGAAGGGTACCATGTGCGAGGAAGGGGGGTTTGAGATTCAACTTTCAAGGGAACGGATATTGGCTTCTCGTGTACGTGATGAACGTCGGTGGAGGGGGAGATTTGGTGACAATGCAAGTGAAAGGAAGCAAGACAGGGTGGATAAGCATGAGCCACAATTGGGGAGCTTCATACCAAGCATTTGCCACATTGAGTGGTCAATCTCTATCTTTTAGGCTCACTTCCTACACTTCCAAAGAGACTCTTTATGCTTGGAATGTTGCTCCTTCTAATTGGCAAGTAGGGTTAACCTACCAATCTAATCTTAATTTCCACTGA 774 47.29 MGRLNFFFVLLILAVTGKSMLVGAVFQPSPWKPAHATFYGDETASETMGGACGYGNLFVNGYGTDTAALSSTLFNNGYACGTCYQIKCFQAKACYTNVAYTTVTTTNLCPPNWSQDSNAGGWCNPPRVHFDMSKPAFMKIADWKAGIVPVLYRRVPCARKGGLRFNFQGNGYWLLVYVMNVGGGGDLVTMQVKGSKTGWISMSHNWGASYQAFATLSGQSLSFRLTSYTSKETLYAWNVAPSNWQVGLTYQSNLNFH 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 970875 971882 + Bpe020948.1 Bpe07g00136 105905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00136 257 Pfam Lytic transglycolase 66 152 IPR009009 -
Bpe07g00136 257 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Bpe07g00136 257 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Bpe07g00136 257 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Bpe07g00136 257 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Bpe07g00136 257 PRINTS Expansin/Lol pI family signature 145 161 IPR007118 GO:0005576
Bpe07g00136 257 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Bpe07g00136 257 SMART dpbb_1 66 152 IPR007112 -
Bpe07g00136 257 SUPERFAMILY Barwin-like endoglucanases 30 180 IPR036908 -
Bpe07g00136 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 172 252 IPR007117 -
Bpe07g00136 257 Gene3D - 163 257 IPR036749 -
Bpe07g00136 257 PANTHER EXPANSIN-A15 8 257 IPR002963 GO:0009664
Bpe07g00136 257 PRINTS Expansin signature 173 194 IPR002963 GO:0009664
Bpe07g00136 257 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Bpe07g00136 257 PRINTS Expansin signature 120 137 IPR002963 GO:0009664
Bpe07g00136 257 PRINTS Expansin signature 161 173 IPR002963 GO:0009664
Bpe07g00136 257 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Bpe07g00136 257 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Bpe07g00136 257 PRINTS Expansin signature 137 150 IPR002963 GO:0009664
Bpe07g00136 257 PANTHER EXPANSIN-A7 8 257 - -
Bpe07g00136 257 Gene3D - 18 158 IPR036908 -
Bpe07g00136 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 162 IPR007112 -
Bpe07g00136 257 SUPERFAMILY PHL pollen allergen 159 252 IPR036749 -
Bpe07g00136 257 Pfam Expansin C-terminal domain 164 241 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00621 Bpe07g00136 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00136 Bpe-Chr7:970875 Bpe04g01713 Bpe-Chr4:22972599 6.97E-94 dispersed
Bpe14g00659 Bpe-Chr14:5299134 Bpe07g00136 Bpe-Chr7:970875 1.97E-39 dispersed
Bpe15g00684 Bpe-Chr15:17500524 Bpe07g00136 Bpe-Chr7:970875 1.25E-39 dispersed
Bpe05g00621 Bpe-Chr5:20140121 Bpe07g00136 Bpe-Chr7:970875 3.15E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00136 - - qsu:111989333 442.195