Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00141 ATGGCCACTTCCGGTGGCGTTAGTTGTAGAAATGGCAGTTCACGGAACTCTCTCAGGGGGGATAAGCCTCTGTCTGTTAACTCGAACGCTAAGTCTGCTCTCAAAACGAAGAGTTTTTCTAATTCCGGGACTCGTCGCAGCTGTCCGGCCTCTCTTGGCGGTCCCAATGCAGCTGCAAAGAATGACGATGGAGTGACGGGAAGAGTTCGCGTAGCTGTCAGATTGCGACCTCGAAATGCAGAGGAAATTGCAGCAGATGCTGATTTTGCAGATTGTGTTGAATTGCAACCAGAGCTTAAAAGGTTGAAACTTCGGAAGAACAACTGGGACTCAGACACTTATGAATTTGATGGGGTGCTAACTGAGTTTGCATCACAAAAACGCGTCTATGAAGTCGTGGCAAAGCCGGTTGTGGAGAGTGTGCTGGATGGCTATAACGGGACAGTAATGGCATATGGACAGACTGGTACTGGTAAAACGTATACTCTTGGCCGGATAGGAGAATCGGATATGGCTGATCGAGGAATTATGGTCCGGGCTATGGAAGACATTTTGGCAGATGTTTCCTTTGAAACAGATTCTGTCACAGTTTCCTATTTGCAGCTTTATATGGAGACAATACAGGACCTCCTAAATCCTGCAAATGATAATATTTCATTTTCAGAAGACCCAAAAACTGGAGATGTTTCGATTCCTGGTGCTTCCATTGTTGAAATAACGGATCAACAGACCTTTTTGGAACTCCTTAGATTAGGAGAAGTTCACCGCTTCGCTGCAAATACAAAATTAAATACTGAATCTTCACGCAGTCATGCGATTTTGATGATCTATGTAAAACGTTCGGTCAAGGATAGTGATCAGATTCATTCAGGCGAAAGTTATGAAGGGTCCTGTCAGTTTAAATCTTTCAAACCTCCAATTGTTCGAAAGGCAAAGTTAGTAGTGGTCGATCTTGCTGGTTCAGAACGCATCGATAAATCAGGAAGTGAGGGGCATACACTTGAGGAAGCCAAATCTATAAATCTTTCTTTAAGTGCATTGGGGAAATGCATAAATGCTCTAGCTGAGAATAGTGCGCATATTCCTGTTCGGGATTCAAAGCTTACTAGATTACTTCGAGATTCCTTTGGGGGGACAGCAAGGACTTCCCTGGTTATTACGATTGGTCCATCACCTCGTCATAGGGGAGAAACAGCAAGTACAATTATGTTTGGGCAGCGAGCGATGAAGGTTGAAAATATGTTAAAAATAAAGGAGGAATTCGATTATAAAAGTCTATCAAGAAAGCTAGACATACAATTGGACAAACTCATCGCTGAACAAGAAAGGCAGAGGAAAGCTTTTGAGGATGAAATTGAAAGAACAACCATGGCAGCTCAAAATAAGATTTTGGAGGCAGAAAGAAACTATGCAAACGCACTAGAGAAGGAGAGACTGAAGTATCAGAATGATTATATGGAATCAATAAGGAAGCTTGAAGAAAAATTGATGATGAATCAGCGAAAGCACGAGAATGAAAACATGAAGAATGGGTTCAAAGATGAAAACTCTAACTTGAATCCTAACATGTCCGCCGTTGAGGGATTAGCCAAGCTAAAAGAGTTGCTTCAGAAAGAAAATCTACTACGAAATGCAGCCGAAAAGGAAATCAGTGACCTTAAAAGTCAAATAGAACAACTGAAAAGGTCTGAGGTGTCCGGAAATTCAGAGATCTTAAAGCTACGCAAGATGCTGGAACACGAGACAAATTTGAAAGAGAAACTCGAAGGGGAAATAATGGTGCTTCGTAGTCAGTTGTTGAACTTGAGTTTGAAAGCTGATGAGACGAGAAGGCGAATCAATAGTGGAGAGTCAGGAAAAGTGCTTGGAGCTCTAGATGCTTTGATGTCTCAAGCAAGGCATACACTCGAGAAAGATTCTGGAAATGGTGATAGAAATTCAATGGAAAAACTCTTTGAACAAGTGGGACTACAGAAAATCCTTTCATTGTTGGAAGCAGAAGATTCTGACGTGGGAGTCCATGCTGTGAAAGTAGTTGCAAATCTAGCTGCTGAAGAAACAAATCAGCAGAAGATTGTCGAAGCCGGTGGTCTCACATCGTTGTTAAGACTTCTTAAAATCTCGAAGGATGAGAATATTCATAGAGTAGCTGCCGGTGCTATTGCGAATCTGGCCATGAATGAAACTAACCAGGATCTAATAATGGCTCAAGGCGGCATTGGCTTGTTGTCCGTGACAGCTGCTAATGCCAAAGATCCCCAGACCCTTCGAATGGTTGCCGGAGCGATTGCCAACCTTTGTGGAAATGGTAAATTACAGACAAAGCTGAGCAGCGAAGGTGGCATTAAGGCGTTGCTCGGAATGGTCAGTTGCAGACATCTTGAGGTTCTTGCTCAAGTTGCTCGTGGAATTGCAAATTTTGCTAAGTGCGAGTCAAAAGCACCTACACAAGCGATTAAGATGAGGAAGTCTCTCTTGATCGAGGATGGAGGACTTGCCTGGATTATTCAGAATGCCAATAACGAAGCCTCGCCAATTCGACGCCACATTGAACTTGCTCTATGCCATTTGGCGCAAAACGAAATGAATGCAAAAGACATGGTCTGCGGAGGCGCAGTCTGGGAGCTTGTTCGTATAGCTCGAGAATGTTCCCGGGAAGACATAAGAACTCTCGCCCTTCAAGCACTGACTTCTAGCCATGCTTTCAATGCCGAAGCAAGGAGACTAATGATCGATTATTATTGA 2745 43.21 MATSGGVSCRNGSSRNSLRGDKPLSVNSNAKSALKTKSFSNSGTRRSCPASLGGPNAAAKNDDGVTGRVRVAVRLRPRNAEEIAADADFADCVELQPELKRLKLRKNNWDSDTYEFDGVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTYTLGRIGESDMADRGIMVRAMEDILADVSFETDSVTVSYLQLYMETIQDLLNPANDNISFSEDPKTGDVSIPGASIVEITDQQTFLELLRLGEVHRFAANTKLNTESSRSHAILMIYVKRSVKDSDQIHSGESYEGSCQFKSFKPPIVRKAKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHIPVRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETASTIMFGQRAMKVENMLKIKEEFDYKSLSRKLDIQLDKLIAEQERQRKAFEDEIERTTMAAQNKILEAERNYANALEKERLKYQNDYMESIRKLEEKLMMNQRKHENENMKNGFKDENSNLNPNMSAVEGLAKLKELLQKENLLRNAAEKEISDLKSQIEQLKRSEVSGNSEILKLRKMLEHETNLKEKLEGEIMVLRSQLLNLSLKADETRRRINSGESGKVLGALDALMSQARHTLEKDSGNGDRNSMEKLFEQVGLQKILSLLEAEDSDVGVHAVKVVANLAAEETNQQKIVEAGGLTSLLRLLKISKDENIHRVAAGAIANLAMNETNQDLIMAQGGIGLLSVTAANAKDPQTLRMVAGAIANLCGNGKLQTKLSSEGGIKALLGMVSCRHLEVLAQVARGIANFAKCESKAPTQAIKMRKSLLIEDGGLAWIIQNANNEASPIRRHIELALCHLAQNEMNAKDMVCGGAVWELVRIARECSREDIRTLALQALTSSHAFNAEARRLMIDYY 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 998637 1005501 + Bpe020952.1 Bpe07g00141 105910

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00141 914 SMART arm_5 645 684 IPR000225 GO:0005515
Bpe07g00141 914 SMART arm_5 727 768 IPR000225 GO:0005515
Bpe07g00141 914 SMART arm_5 685 726 IPR000225 GO:0005515
Bpe07g00141 914 SMART arm_5 860 901 IPR000225 GO:0005515
Bpe07g00141 914 SMART arm_5 769 809 IPR000225 GO:0005515
Bpe07g00141 914 Coils Coil 438 509 - -
Bpe07g00141 914 MobiDBLite consensus disorder prediction 1 62 - -
Bpe07g00141 914 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 696 739 IPR000225 GO:0005515
Bpe07g00141 914 PRINTS Kinesin heavy chain signature 361 382 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00141 914 PRINTS Kinesin heavy chain signature 144 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00141 914 PRINTS Kinesin heavy chain signature 312 330 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00141 914 PANTHER KINESIN-LIKE PROTEIN KIN-UA 50 903 IPR033291 GO:0008017|GO:0032886|GO:0048364
Bpe07g00141 914 SMART kinesin_4 66 419 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00141 914 Pfam Armadillo/beta-catenin-like repeat 688 725 IPR000225 GO:0005515
Bpe07g00141 914 Coils Coil 571 605 - -
Bpe07g00141 914 Gene3D Kinesin motor domain 59 442 IPR036961 -
Bpe07g00141 914 SUPERFAMILY ARM repeat 621 904 IPR016024 -
Bpe07g00141 914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 445 IPR027417 -
Bpe07g00141 914 Gene3D - 597 913 IPR011989 -
Bpe07g00141 914 CDD KISc 68 409 - -
Bpe07g00141 914 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 655 697 IPR000225 GO:0005515
Bpe07g00141 914 Coils Coil 529 563 - -
Bpe07g00141 914 PANTHER KINESIN-RELATED 50 903 IPR027640 GO:0003777|GO:0007018
Bpe07g00141 914 MobiDBLite consensus disorder prediction 1 49 - -
Bpe07g00141 914 Pfam Kinesin motor domain 74 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00141 914 ProSitePatterns Kinesin motor domain signature. 311 322 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bpe07g00141 914 ProSiteProfiles Kinesin motor domain profile. 68 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00141 - - K10396 qsu:112016186 1326.23
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00141 Bpe-Chr7:998637 Bpe13g00915 Bpe-Chr13:15125293 0 dispersed
Bpe07g00141 Bpe-Chr7:998637 Bpe08g01462 Bpe-Chr8:15316929 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g461 . . . . . Bpe07g00141 . . Cmo06g01154 . . . . . . . Cpe05g00275 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma12g00119 . . . Cma06g01129 . Car06g00965 . Cpe08g00491 . Bhi12g00356 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001054 3 5 3 2 3 2 5 2 2 2 2 2 4 2 2 4 2 3 4 2 2 2 2 2 2 2 2 5 2 3 80
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00141 Bpe_Chr07 FPKM 4.629373 4.849192 5.925702 5.571784 7.826251 7.265245 8.980945 6.788686 7.123656 7.303604