Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00142 ATGGACGCCCATTCTCTTCCACCTCCTTTCAACAGCAGAGATTTCCATCTTCTCCAACAGCAACACGAATTTCTTCAACTTCAACAACAGCAAAGTTCAGATCATGACCAGCAAAGGGGTGGCAGCGGAATGAACCAAACCAAAAAACGAGATCGCGACGAAAATAGCGATAATGGAGGAGAAGGCAGCAAAGACCTGGCCGGAGAGGGATCAGAAATGTCTAGACGACCCCGAGGAAGACCGGCCGGATCCAAAAACAAACCCAAACCTCCTATCATCATTACTAGAGACAGCGCTAACGCTCTACGCACCCATGTTGTAGAAGTCGCTGACGGATGTGACATCATCGAGAGTGTTTCCACCTTTGCTCGCCGGAGACAAAGGGGGGTCTGCATTATGAGCGGCGCCGGAACGGTGACGAACGTCACGATCCGGCAGCCGGCTTCGACTGGTGCTGTCGTCACTTTACACGGCCGGTTTGAGATCTTATCATTATCCGGCTCGTTTCTACCGCCTCCAGCGCCCCCGGCAGCCACTGGGTTGACCATATATTTGGCCGCAGGGCAAGGGCAAGTGGTCGGAGGAAGTGTCGTCGGGAAACTCGTTGCTTCCGGTCCCGTTGTAATTATGGCCGCTTCGTTTAGCAACGCTGCCTACGAGAGGCTTCCACTTGACGACTATGAAGAGCCCCCGCCGTTGCCTATCCAAGGAAGCTCAATTGGATCACCTGGTGCAGTTAATCAGACACCTCAAGCTCCGCCATTAATGGCGGATGGAAATCAGCCGCCTTTATTTCATGGGATGCCTCCGAATCTTCTAAACTCCATTCAATTACCATCTGAAGCTTACTGGGCAAGTGGTCGACCTCCCTAG 873 52.69 MDAHSLPPPFNSRDFHLLQQQHEFLQLQQQQSSDHDQQRGGSGMNQTKKRDRDENSDNGGEGSKDLAGEGSEMSRRPRGRPAGSKNKPKPPIIITRDSANALRTHVVEVADGCDIIESVSTFARRRQRGVCIMSGAGTVTNVTIRQPASTGAVVTLHGRFEILSLSGSFLPPPAPPAATGLTIYLAAGQGQVVGGSVVGKLVASGPVVIMAASFSNAAYERLPLDDYEEPPPLPIQGSSIGSPGAVNQTPQAPPLMADGNQPPLFHGMPPNLLNSIQLPSEAYWASGRPP 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1007613 1008485 - Bpe020953.1 Bpe07g00142 105911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00142 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 290 IPR014476 GO:0003680
Bpe07g00142 290 CDD DUF296 103 186 IPR005175 -
Bpe07g00142 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 229 - -
Bpe07g00142 290 MobiDBLite consensus disorder prediction 45 60 - -
Bpe07g00142 290 MobiDBLite consensus disorder prediction 240 255 - -
Bpe07g00142 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 3 290 - -
Bpe07g00142 290 MobiDBLite consensus disorder prediction 1 92 - -
Bpe07g00142 290 MobiDBLite consensus disorder prediction 14 44 - -
Bpe07g00142 290 MobiDBLite consensus disorder prediction 235 271 - -
Bpe07g00142 290 Gene3D - 102 229 - -
Bpe07g00142 290 ProSiteProfiles PPC domain profile profile. 99 236 IPR005175 -
Bpe07g00142 290 PIRSF ESCAROLA 15 290 IPR014476 GO:0003680
Bpe07g00142 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 216 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00142 Bpe11g00699 CCT
Bpe05g00608 Bpe07g00142 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00142 Bpe-Chr7:1007613 Bpe08g01463 Bpe-Chr8:15334411 1.01E-114 dispersed
Bpe11g00699 Bpe-Chr11:5379086 Bpe07g00142 Bpe-Chr7:1007613 2.08E-117 wgd
Bpe05g00608 Bpe-Chr5:20055925 Bpe07g00142 Bpe-Chr7:1007613 1.74E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00142 - - vvi:100265031 357.451