Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00145 ATGGAGGTTAGAGAAAGTGGGGTTACGGTGGTTAGATCAGATGCTCCGTCGGAGTACCACATAGCTCCGAGGACGGAAAAATCAGTCTCTGTCGGTAATCCCACACCGCCGGCGACGGAGCTGGGGAAGAAGAAAAGGGGCCGGCCGAGGAAGTACTTACCAGACGGTTCTCTCAACCCGGCTGTGTCGCCCAAGCCGATATCCTCTTCCGTTACTCCGCCGGTGATCGATTTCTCGGCAGCGAAGAGAGGAAAATTCCGGCCGGCGAGCTCTGTGAGCAAAACAAAGTACGAGTTGGAGAATATAGGTAGTGAATGGGTGGCGTGTTCTGCCGGAGCTAACTTCACGCCGCATATTATTACAGTCAACTCCGGCGACGACGTCACTACGAAAATTCTCTCGTTTTCCCAACACGGGCCTCGGACCATATGTGTTCTATCTGCAAATGGCGTGATCTCCAGTGTAACGCTTCGACAGCCTGATTCCTCCGGCGGTACATTGACATACGAGGGTCGGTTTGAAATATTGTCCTTATCGGGATCGTTCACACCTAACGATACCGGAGGGACACGAAGCAGGACGGGAGGAATGAGCATCTCTTTAGCCAGTCCCGATGGACGAGTAGTCGGTGGTGGCATAGCCGGTTTACTAGTGGCTGCAAGTCCCATACAGGTCGTGGTAGGCAGTTTTCTATCAGGAAACCAGCATGAACAGAAACCCAAGAAGCAAAAACATGACTGCAACTCAACTTCGCCACCATCTGAAGCTCTTCCAGTTTCCGACAAAAATCCAAAGGCAAATTTCTCGAATTCCTCGCCTTTCCGAGGCAATAATTGGTCATTACCTCCACCGGATTCAAGAAGCAAGCCAACTGATATCAATATATCTTTACCAGGAGCGATAGTCTAA 909 50.94 MEVRESGVTVVRSDAPSEYHIAPRTEKSVSVGNPTPPATELGKKKRGRPRKYLPDGSLNPAVSPKPISSSVTPPVIDFSAAKRGKFRPASSVSKTKYELENIGSEWVACSAGANFTPHIITVNSGDDVTTKILSFSQHGPRTICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFTPNDTGGTRSRTGGMSISLASPDGRVVGGGIAGLLVAASPIQVVVGSFLSGNQHEQKPKKQKHDCNSTSPPSEALPVSDKNPKANFSNSSPFRGNNWSLPPPDSRSKPTDINISLPGAIV 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1020199 1022194 + Bpe020956.1 Bpe07g00145 105914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00145 302 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 230 IPR005175 -
Bpe07g00145 302 Gene3D - 117 247 - -
Bpe07g00145 302 MobiDBLite consensus disorder prediction 249 293 - -
Bpe07g00145 302 MobiDBLite consensus disorder prediction 234 302 - -
Bpe07g00145 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 6 298 IPR039605 GO:0003680
Bpe07g00145 302 MobiDBLite consensus disorder prediction 1 69 - -
Bpe07g00145 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 6 298 - -
Bpe07g00145 302 ProSiteProfiles PPC domain profile profile. 112 253 IPR005175 -
Bpe07g00145 302 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 235 - -
Bpe07g00145 302 CDD DUF296 116 230 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00145 Bpe11g00702 CCT
Bpe07g00145 Bpe11g00702 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00145 Bpe-Chr7:1020199 Bpe13g00952 Bpe-Chr13:15419854 4.12E-68 dispersed
Bpe02g00748 Bpe-Chr2:5216624 Bpe07g00145 Bpe-Chr7:1020199 6.12E-73 transposed
Bpe11g00702 Bpe-Chr11:5414807 Bpe07g00145 Bpe-Chr7:1020199 1.22E-151 wgd
Bpe12g00400 Bpe-Chr12:9426340 Bpe07g00145 Bpe-Chr7:1020199 5.96E-87 wgd
Bpe07g00145 Bpe-Chr7:1020199 Bpe07g00968 Bpe-Chr7:15472111 2.20E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00145 - - qsu:112038658 421.009