Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00159 ATGTCATCTTCTCCGACTCCTCCCTTTTCTCCCGCTCTGGACCACCTTCCTCTCTCCGAGCAGCTATGTTATGTCCACTGCAATATTTGTGACACCGTCCTTGCGGTGAGTGTTCCTTGCACTAGTTTCTTCAAGACTGTGACAGTCCGATGCGGCCATTGCACTAACCTTTTGCCTCTGACTATGAGAGCTTTGCTTTTTCCTTCAACTAATCCTCAGTTTCATCAGCTGAATCAGCCTTTCTTCTCTTCTTCTCTCAATCTTCTGGAAGAGGTCCAGAATCCATCACCCAACTTTATGATCAGCCAAACAAGTGCAAATCCCTACCACTTTACGCCCCGAGTATCTGATGAGGTTTCAAGAGCTCCTGTAATTAACAAACCTCCAGAGAAGAGACAAAGAGTTCCCTCTGCATATAACAGGTTCATCAAAGACGAGATTCAACGCATTAAATTAGTGAATCCCGATATATCACACAGAGAAGCTTTCAGCGCAGCAGCTAAGAACTGGGCCCACTTTCCCCATATTCAGTTCGGTCTCATGCCTGATCAAACTCTGAAGACGAAGACAAACATGCGACAGGAAGGCGAAGAGCTTATGACAATGAAAGATGGGTTTTTGGGATCAAATAACGTGGATTTCTCCCCTTTCTAA 654 45.26 MSSSPTPPFSPALDHLPLSEQLCYVHCNICDTVLAVSVPCTSFFKTVTVRCGHCTNLLPLTMRALLFPSTNPQFHQLNQPFFSSSLNLLEEVQNPSPNFMISQTSANPYHFTPRVSDEVSRAPVINKPPEKRQRVPSAYNRFIKDEIQRIKLVNPDISHREAFSAAAKNWAHFPHIQFGLMPDQTLKTKTNMRQEGEELMTMKDGFLGSNNVDFSPF 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1098565 1100249 + Bpe020969.1 Bpe07g00159 105928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00159 217 Pfam YABBY protein 19 180 IPR006780 GO:0007275
Bpe07g00159 217 PANTHER AXIAL REGULATOR YABBY 3 15 212 - -
Bpe07g00159 217 PANTHER PROTEIN YABBY 6-RELATED 15 212 IPR006780 GO:0007275
Bpe07g00159 217 Gene3D High mobility group box domain 120 200 IPR036910 -
Bpe07g00159 217 SUPERFAMILY HMG-box 124 174 IPR036910 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00159 Bpe11g00259 CCT
Bpe05g00592 Bpe07g00159 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00159 Bpe-Chr7:1098565 Bpe13g01366 Bpe-Chr13:18891140 1.07E-38 dispersed
Bpe11g00259 Bpe-Chr11:1881777 Bpe07g00159 Bpe-Chr7:1098565 2.27E-100 wgd
Bpe05g00592 Bpe-Chr5:19976884 Bpe07g00159 Bpe-Chr7:1098565 9.14E-131 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21602 PF04690 YABBY 3.80E-68 CL0114 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00159 K25796 - zju:107403723 307.76