Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00201 TCAGAGAAGAAAGCAGAAGTATCTCTTCTGGTTTCAAAATTTCGAACCCTTCGAACCTTTACTCAACACCCATCTGAATCTTTCGTGAACAGCACTGTTTCTTTCGTTCTAACCCAATCTCCACCAAATTCCAACCAAATCAACAAATTAGAATCCATTTTATCAGAACCCATTTCCAGTTGCCAATCTCAGCTCCATTATTTTCCTTTGGTGCCCCAAAAAAGGTCTGTGATGACCCAAGAATCAAATCTAGCCCACTCTCCGACGCTACCATCGCTCTACCATCTCCGCTATTCCAGTCCTTCAGCTCCAGACCGTTCTTCTTCTTCTTCTTCTTCACCATCTCTGCTCTTTTCTTCTTTATTAGCGTTTCCTCCTATTTCAAATTCGCTGGTTATAAGAATTTTTCGCCAGTTGGGCTGTCCGCAGTTGCTGCGAATCCATTTTCGCTTCTTCATCCTCCTTTCACTTCCTATTGTCTACTTCTTAATTTCTACCTCTCGCCGCTCTTCCGTCCAAAATTTATTAGTCGTACTTTCATTCTCTGTTGCGCTTTTACTTTCTATGAATCTTGCCCTGTCTCGTCTACCCGCTATTCGGCTATTTATAGCTCGCTCCTTCCCTATCAATCTTTTCAGATTTTCTTCCTCCTCAAAGCCTCCCCAGCCTGTGATTTGGTCGATTGGGTCAAAACCCAAATTGGAAAGAAAGCAAAATTCAGGATCCTGGGTTCAAGTATACAGTAACGGGGACGTTTATGAGGGCGAAGTTCACAAAGGGAAAAGCTCAGGGAGCGGGGTTTATCACTATCACATGAGTGGAAGATATGAGGGCGATTGGATTGACCAGAAATACGATGGCTACGGCGTGGAGACGTGGGCGAAGGGAAGCCGGTATAGAGGACAATACCGGCAAGGATTGAGACATGGGATTGGAGTTTACAGGTTTTTCACCGGCGATGTGTATGCAGGGGCGTGGTCTAATGGGCAGTGTCATGGGTGTGGAGTTCATACTTGTGAGGATGGGAGCAAGTATGTTGGGGAGTTTAAGTATGGCCTTAAACATGGTTTTGGCCACTACCATTTCAGGTATATATATGAAATTTTGAAAATTATAATAAGTTTATATAATGTTGAATATTGCAGAAATGGTGACAAATATGCGGGAGAATATTTCGCGGACAAGGTGCATGGTTTTGGAGTGTATCGATTCGCAAATGGACATAGGTACGAGGGAGCTTGGCATGAAGGAAGAAGGCAGGGGCTTGGAATGTACACTTTCAGAAATGGAGAAACTAAATCTGGTCATTGGGAAAATGGTGTAGTCGATGTTCCAAGCGTCCAAAATGCCCAACCCGGATCTCCTTTTGCCGTAAATGATACAAAGATTCTTATTGTGATCCAGCAGGAAGCACGAAGAGCTGCCCAGAAAGCACATGATGTGTGTCAGGTGGATGAGTTGGTGAACAGAGCAATGACAGCAGCCAACAAAGCAGCAAATGCAGCAAGAGTAGCAGCTATTAAGGCTGTCCAAAATCAAATGCATCGGATCGACACTGTCGAAGACAAACCAATTCTTCTCGTATGA 1587 44.05 SEKKAEVSLLVSKFRTLRTFTQHPSESFVNSTVSFVLTQSPPNSNQINKLESILSEPISSCQSQLHYFPLVPQKRSVMTQESNLAHSPTLPSLYHLRYSSPSAPDRSSSSSSSPSLLFSSLLAFPPISNSLVIRIFRQLGCPQLLRIHFRFFILLSLPIVYFLISTSRRSSVQNLLVVLSFSVALLLSMNLALSRLPAIRLFIARSFPINLFRFSSSSKPPQPVIWSIGSKPKLERKQNSGSWVQVYSNGDVYEGEVHKGKSSGSGVYHYHMSGRYEGDWIDQKYDGYGVETWAKGSRYRGQYRQGLRHGIGVYRFFTGDVYAGAWSNGQCHGCGVHTCEDGSKYVGEFKYGLKHGFGHYHFRYIYEILKIIISLYNVEYCRNGDKYAGEYFADKVHGFGVYRFANGHRYEGAWHEGRRQGLGMYTFRNGETKSGHWENGVVDVPSVQNAQPGSPFAVNDTKILIVIQQEARRAAQKAHDVCQVDELVNRAMTAANKAANAARVAAIKAVQNQMHRIDTVEDKPILLV 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1375638 1379545 + Bpe021011.1 Bpe07g00201 105970

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00201 528 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 247 362 - -
Bpe07g00201 528 PANTHER - 381 518 - -
Bpe07g00201 528 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 70 363 - -
Bpe07g00201 528 Pfam MORN repeat 253 271 IPR003409 -
Bpe07g00201 528 Pfam MORN repeat 387 409 IPR003409 -
Bpe07g00201 528 Pfam MORN repeat 276 298 IPR003409 -
Bpe07g00201 528 Pfam MORN repeat 299 321 IPR003409 -
Bpe07g00201 528 Pfam MORN repeat 345 362 IPR003409 -
Bpe07g00201 528 Pfam MORN repeat 322 343 IPR003409 -
Bpe07g00201 528 Pfam MORN repeat 410 431 IPR003409 -
Bpe07g00201 528 Gene3D - 283 328 - -
Bpe07g00201 528 Gene3D - 234 282 - -
Bpe07g00201 528 Gene3D - 329 367 - -
Bpe07g00201 528 Gene3D - 378 461 - -
Bpe07g00201 528 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 379 442 - -
Bpe07g00201 528 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 381 518 - -
Bpe07g00201 528 PANTHER - 70 363 - -
Bpe07g00201 528 SMART morn 343 364 IPR003409 -
Bpe07g00201 528 SMART morn 297 318 IPR003409 -
Bpe07g00201 528 SMART morn 408 429 IPR003409 -
Bpe07g00201 528 SMART morn 251 272 IPR003409 -
Bpe07g00201 528 SMART morn 320 341 IPR003409 -
Bpe07g00201 528 SMART morn 385 406 IPR003409 -
Bpe07g00201 528 SMART morn 274 295 IPR003409 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00201 - - - zju:107430419 575.474
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00076 Bpe-Chr2:579588 Bpe07g00201 Bpe-Chr7:1375638 1.79E-111 dispersed
Bpe05g01154 Bpe-Chr5:23749714 Bpe07g00201 Bpe-Chr7:1375638 1.68E-175 dispersed
Bpe07g00201 Bpe-Chr7:1375638 Bpe04g00475 Bpe-Chr4:3002766 1.41E-09 dispersed
Bpe07g00201 Bpe-Chr7:1375638 Bpe04g01088 Bpe-Chr4:8467686 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g571 . Blo03g00134 Bda06g01305 . . Bpe07g00201 . . Cmo06g00849 Cmo16g01146 . . . . Sed05g2359 Cpe14g00907 . Bhi11g00093 Tan01g2116 Cmetu06g0894 . Hepe06g1074 Mch10g1606 . Cla10g00203 Cam10g0209 Cec10g0214 Cco10g0215 Clacu10g0212 Cmu10g1055 Cre10g0463 . . Cone6ag0628 Cone9ag0631 Lsi07g01244 . . Cme06g02515 . . . . . . . Bma12g00195 . . Cmo19g00513 Cma06g00826 Cma16g01097 . Car16g01039 . . . . . . . . . . . . . . . . . Csa03g00218 Chy06g02102 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010482 1 1 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 0 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00201 Bpe_Chr07 FPKM 1.065798 0.0 0.393004 0.484195 3.29018 4.332659 3.764832 0.814009 0.728297 1.026083