Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00233 ATGAGTTTTCAAGATATCGAGGCGGGTCGGCCCTTTGCTTATTCGAGGCGGGACGGAATCAATGCCAAGCAGGACCCGACACAGGCCGTCGCTTCTGGTATATTTCAGATCAACACCGCTGTCGCCACCTTTCAGAGGCTCGTCAATACTCTGGGAACTCCGAAGGACACCCCCGAGCTCCGAGAGAAGCTGCATAAGACGAGGCTTCATATTGGACAGTTGGTGAAAGATACTTCTGCAAGACTAAAACAAGCTAGTGAAATAGATCATCAAACTGAAGTTAAAGCCAGCAAGAAAATTGCAGATGCAAAGCTCGCTAAAGACTTTCAAGCTGTGCTGAAAGAATTTCAAAAGGGTCAACGACTTGCAGCCGAGAGAGAAACTGCGTATACTCCTTTTGTTCCACAAGCAGTTCTCCCTTCTAGCTACACGGCCAGCGAGATTGATGTACGATCAGATAAGAATCCCGAACAGCGTGCACTCCTTGTTGAATCTAGGAGACAAGAAGTACTGCTTTTGGACAACGAAATTTCGTTTAACGAGGCGATAATCGAGGAAAGAGAGCAAGGGATCGAAGAAATACAACAGCAAATAGGGGAAGTGAATGAGATTTTCAAAGATTTAGCAGTTCTGGTGCATGAGCAAGGAGCCATGATTGACGATATTGGATCCAACATTGAGAGTTCCCACGCCGCAACTTCGCAAGCGACTTCCCAACTCGTGAAAGCTGCAAAGACCCAAAGATCAAATTCGTCACTGTCCTGCTTGCTGTTGGTGATATTTGGGATCTTGCTTCTCATTGTTATCATACTCATCGCTGCTTGA 825 46.3 MSFQDIEAGRPFAYSRRDGINAKQDPTQAVASGIFQINTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSARLKQASEIDHQTEVKASKKIADAKLAKDFQAVLKEFQKGQRLAAERETAYTPFVPQAVLPSSYTASEIDVRSDKNPEQRALLVESRRQEVLLLDNEISFNEAIIEEREQGIEEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIESSHAATSQATSQLVKAAKTQRSNSSLSCLLLVIFGILLLIVIILIAA 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1658418 1662089 - Bpe021044.1 Bpe07g00233 106002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00233 274 ProSitePatterns Syntaxin / epimorphin family signature. 187 226 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bpe07g00233 274 Gene3D - 174 274 - -
Bpe07g00233 274 Pfam Syntaxin-like protein 31 130 IPR006011 GO:0016020
Bpe07g00233 274 Gene3D - 18 134 - -
Bpe07g00233 274 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 181 243 IPR000727 -
Bpe07g00233 274 SMART SynN_4 15 128 IPR006011 GO:0016020
Bpe07g00233 274 SMART tSNARE_6 176 243 IPR000727 -
Bpe07g00233 274 SUPERFAMILY t-snare proteins 24 236 IPR010989 GO:0016020|GO:0016192
Bpe07g00233 274 PANTHER SYNTAXIN 7 273 IPR045242 -
Bpe07g00233 274 CDD SNARE_Qa 184 242 - -
Bpe07g00233 274 Pfam SNARE domain 218 269 IPR000727 -
Bpe07g00233 274 PANTHER SYNTAXIN OF PLANTS PROTEIN 7 273 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00520 Bpe07g00233 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00233 Bpe-Chr7:1658418 Bpe01g00396 Bpe-Chr1:2457994 2.10E-10 dispersed
Bpe14g01345 Bpe-Chr14:10726119 Bpe07g00233 Bpe-Chr7:1658418 3.49E-85 transposed
Bpe05g00520 Bpe-Chr5:19384275 Bpe07g00233 Bpe-Chr7:1658418 5.70E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00233 - K08488 bhj:120089793 416.772