Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00258 ATGGATTTCTCTGAATTTCAACCACTGGATGAAATTTCTTTAATCGAATACATCAAAAGCGTTCCCTCTCTTTATTCTATGCTTGGGAATAACTTCGATAATGCTCAGATTAAGGAGGTGGGAGATGGCAATCTTAATTTCGTGTACATCGTCGTAGGTTCCTCCGGTTCTTTTGTCATCAAACAGGCACTTCCCTACATACGTTGTATAGGTGAATCATGGCCACTGTCAAAGGATCGAGCATATTTTGAGGTGTTGGCATTAAGAGAGCACAACCGTTTTAGTCCCAATCATGTTCCGGAAGTTTATCACTTTGATCGGACTATGTCTGTGATTGGCATGCGATATTTAGAACCTCCACACATCATCCTGAGGAAAGGATTGATTGCTGCAATTGAATATCCATTCCTGGCAGAGCACATGTCAACATATATGGCCAAGACACTTTTTTGCACATCAATCCTATATCATTCTACAGCAGAGCATAAGAGTGCTGTTGCAGAATTTTGTGGGAACGTTGCACTATGCAGGCACACTGAGCAGGTTGTTTTTTCTGATCCTTATAAAGTGTCACAACATAGTCGATGGACTTCCCCCTACCTTGATCACGAGGCAGAGGCTGTTCGTGAGGATAATGGTTTAAAGCTTGAAATTGCAGAGTTGAAATCCAGATTCATTGAGAATGCACAAGCTCTTATCCATGGAGATCTCCATACTGGTTCTGTCATGGTTACTCAAGAATCGACCCAAGTTATTGATCCAGAATTTGCATTTTATGGACCAATGGGATTTGATGTTGGAGCATTTCTTGGGAACTTGATTTTAGCTTTCTTTGCCCAAGATGGACACGCCAATGAAGGAAAGGATCGAAAAGCATATAAAGAGTGGATTTTGAGGGCAATTGAAGATACTTGGACACTTTTTGAGAAGAAATTCACTGAACTTTGGAATGAGCACCAGGATGGTGGTGGTGAGGCTTATCTTCCTGCAATTTATGACAACCAAGAGCTTCGTTTGGTTGCCCAAAAGAGATATATACTTGAGTTATTCCATGATACACTTGGATTTGGAGCTGCCAAAATGATTAGGAGGATTGTTGGAGTGGCACACGTTGAAGATTTTGAATCGATCAGCGATCTGAGCAAACGATCTTGGTGCGAACGCCGAGCTCTTGTATTTGCGAAATCGCTTCTCAAGGAAAGAAGAAAATTTCTAGCCATCTCAGAAGTACTTTTAGCCATTAAGCAAGTCCAGTAG 1257 41.37 MDFSEFQPLDEISLIEYIKSVPSLYSMLGNNFDNAQIKEVGDGNLNFVYIVVGSSGSFVIKQALPYIRCIGESWPLSKDRAYFEVLALREHNRFSPNHVPEVYHFDRTMSVIGMRYLEPPHIILRKGLIAAIEYPFLAEHMSTYMAKTLFCTSILYHSTAEHKSAVAEFCGNVALCRHTEQVVFSDPYKVSQHSRWTSPYLDHEAEAVREDNGLKLEIAELKSRFIENAQALIHGDLHTGSVMVTQESTQVIDPEFAFYGPMGFDVGAFLGNLILAFFAQDGHANEGKDRKAYKEWILRAIEDTWTLFEKKFTELWNEHQDGGGEAYLPAIYDNQELRLVAQKRYILELFHDTLGFGAAKMIRRIVGVAHVEDFESISDLSKRSWCERRALVFAKSLLKERRKFLAISEVLLAIKQVQ 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1860284 1864824 + Bpe021070.1 Bpe07g00258 106027

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00258 418 Gene3D Phosphorylase Kinase; domain 1 1 120 - -
Bpe07g00258 418 Pfam Phosphotransferase enzyme family 37 272 IPR002575 -
Bpe07g00258 418 PANTHER METHYLTHIORIBOSE KINASE 2 418 - -
Bpe07g00258 418 Gene3D - 121 418 - -
Bpe07g00258 418 SUPERFAMILY Protein kinase-like (PK-like) 5 411 IPR011009 -
Bpe07g00258 418 PANTHER METHYLTHIORIBOSE KINASE 2 418 - -
Bpe07g00258 418 PIRSF MTRK 1 418 IPR009212 GO:0009086|GO:0046522
Bpe07g00258 418 TIGRFAM MTRK: S-methyl-5-thioribose kinase 38 415 IPR009212 GO:0009086|GO:0046522
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00258 K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] - zju:107427009 676.396
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00494 Bpe-Chr5:19153462 Bpe07g00258 Bpe-Chr7:1860284 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g641 . . . Bda08g00661 Bpe07g00258 . . Bma12g00263 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006086 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 2 1 1 1 1 2 2 2 2 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00258 Bpe_Chr07 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0