Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00264 ATGGCTATCGACATCCCCATCTTAGAACAGAGGTACATTGATGCTTGTAGGAGGCATGGAGTCCCACCGAATACTGCAATTTTATCCGGTTTCTTTAAGGCTGAGGTCAAAAGATCCGGCTATCAGCAATGCATCCTAGATATCTTCTTGGACCAACTTAAGGATATTGATTTTCTTCCACTACTTGAAGTATGCATGGAACTTGATTCTTCTGAGATTGAAGCAGTTGATATCCGTAATGAATCTTCATGTGTGTTCAATGGGGAGTATGCTTTATCGTTGATGCATGCTATTAATGGAAAACTTCGAAAAGTTGATCTCAACGATTTATCTTTTGGAAAGGACTTCCTACGGGATTTGTCCCAGCGAGGTTTGAAATGTCAAGTTTTAACATTGAGGTCGTCTCATTTTCGGAAACTCAATTTAGTTGGGGAATTCACACAAATACACACCCTCAACCTTGATTTCAGCACTTCGCTCACTAGTTTCCGTGAGGATTGCTTTGCTTGCATGCCCAACCTGAGGTTTCTATCACTGTGTGACACAAGAATTTCAAATCTTTGGACAACGTCAGCGGCACTTTCTAAACTACCTTCTTTACTGGATCTTCGGTTTCAACATTGGCTATGTTGCAATGATAACGTGCCTCATTCTCCAACAACTGGTTCAAAGTTCGATGATAGAGGAGATCTCTCCCAACTAAGTGACTGGCCTCATGATGGTCATTTTTCTATCGATCCTAATTTAAGTGCTGGAGAAGAGATTAGGAACATGCTTTCGCGTAATAGTGCAACTAATAATCATGATGTTCTTGGCATGATTGAAGATTCATCAGATGATAGCGAAGTGGATTTTTCGAATCACCCTCAAGAACTTGGCTTATCAGATGTATCCTTTAACTGGGCTTCTTGGTGGAACGGACAGGGTGATCTACAGGAGGTTTCTCCCGATATGTTGTTTGATGAGAACGAGGAACAATTTACAATTGGTGCATATACGAGGCATATTGCTGATGTCTCATTGAAATATATTTCTCATAATGCTTCCCCGATATGCTTCGAAAAACATTATAGAGAGTACATGATAGCTTCTTTACCCAATTTGAAAGTCTTAGATAACTTGCCCATTAGAAAGATCGACAGAGAAAGGGCTATTAGTACATATTCACAGTACTTTGAGTATCTTCCGTACCAAAGGGGGCATAAGGAGAGTTTAGTGCGTATTATTCAGAACCGTGAAATCAAAGCAAGCCAGAACCGCGAGTGGAGTTCCAAGCAAAAGATTATTTATCCTTCGAGAAAGTCTCAAAGTTCTTATGCTAGGTCTCTTTGTGCTGCAAAAGTGGGATCTTCTACTTGGCCTTTTCTGCGTCCTCTGTCTGTTTTGAGTAATGATTTGGGAGATGGAGGCCGGAGATTTCGTCCCCGACAATTTGAGTACCATCCATCTGATCCTAGCCTTATGGTCTTTGGAACTTTAGATGGTGAAGTTGTTGTAGTGAATCACGAGAATGGGAAAATCGTTAGTTATATCCCATCGATTGGAGAAATGAATAGTGTGCTTGGACTCTGTTGGCTCAAGAATCATCCCTCAAAGCTCATAGCGGGTTCAGACAATGGCTTGCTAAAATTGTACGATATCAGACACACGCCATCTACATTCAGAGGCATATACAGCATAACTGGGTCAGCAAACTTTGAGGATTTTGACCAGTTAACTTCTGTTCATGTTAATTTGACGGATGAACTGTTTCTTGCAAGTGGATATTCGAGAAATGTTGCATTATATGACATAAATACTGGGAGACTCTTACAGGTCTTCACTGATATGCACCGGGAGCATATTAACGTTGTGAAGTTTGCAAATCATTCCCCGTCAATTTTCGCTACTTCTTCCTTTGATCAGGATGTCAAGATGTGGGATTTGAGGCAAAAACCAATCGTTCCCTGCTACACGTCTTCGAGCTCTCAGGGAAATGTAATGGTTTGTTTTTCTCCAGACGATCACTTTCTCCTCGTATCAGCCGTTGACAATGAGGTCAGACAACTTCTGGCTGTTGATGGGAGGCTACACTTGAATTTTGATATTGCTTCCACAGGAAGCTCTCAGAATTATACTCGTTCTTACTACATGAATGGAAGAGACTATGTTATCAGCGGTAGCTGTGACGAACATGTTGTTCGTGTTTGTTGCGCTCAAACTGGGAGACGTCTTCGGGATATATCTTTAGAGGGAAAGGGATACGGGAATACCATGTTTGTGCAATCTCTGAGGGGAGATCCTTTCAGAGAGTTCAACATGAGCATCTTAGCGGCCTATGTGCGACCTAGTTCGAGATCCGAAATCGTCAAGGTCAATTTGCTTGCTTCTAATGAGCAGGCTAAGGATTATCCTAATAGTCATCATTCTCGATCATTCAACCGGAAGGGAGGTTGA 2436 41.63 MAIDIPILEQRYIDACRRHGVPPNTAILSGFFKAEVKRSGYQQCILDIFLDQLKDIDFLPLLEVCMELDSSEIEAVDIRNESSCVFNGEYALSLMHAINGKLRKVDLNDLSFGKDFLRDLSQRGLKCQVLTLRSSHFRKLNLVGEFTQIHTLNLDFSTSLTSFREDCFACMPNLRFLSLCDTRISNLWTTSAALSKLPSLLDLRFQHWLCCNDNVPHSPTTGSKFDDRGDLSQLSDWPHDGHFSIDPNLSAGEEIRNMLSRNSATNNHDVLGMIEDSSDDSEVDFSNHPQELGLSDVSFNWASWWNGQGDLQEVSPDMLFDENEEQFTIGAYTRHIADVSLKYISHNASPICFEKHYREYMIASLPNLKVLDNLPIRKIDRERAISTYSQYFEYLPYQRGHKESLVRIIQNREIKASQNREWSSKQKIIYPSRKSQSSYARSLCAAKVGSSTWPFLRPLSVLSNDLGDGGRRFRPRQFEYHPSDPSLMVFGTLDGEVVVVNHENGKIVSYIPSIGEMNSVLGLCWLKNHPSKLIAGSDNGLLKLYDIRHTPSTFRGIYSITGSANFEDFDQLTSVHVNLTDELFLASGYSRNVALYDINTGRLLQVFTDMHREHINVVKFANHSPSIFATSSFDQDVKMWDLRQKPIVPCYTSSSSQGNVMVCFSPDDHFLLVSAVDNEVRQLLAVDGRLHLNFDIASTGSSQNYTRSYYMNGRDYVISGSCDEHVVRVCCAQTGRRLRDISLEGKGYGNTMFVQSLRGDPFREFNMSILAAYVRPSSRSEIVKVNLLASNEQAKDYPNSHHSRSFNRKGG 811
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1904044 1909539 - Bpe021076.1 Bpe07g00264 106033

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00264 811 Gene3D Ribonuclease Inhibitor 93 224 IPR032675 -
Bpe07g00264 811 SMART LRRcap_2 354 372 IPR003603 -
Bpe07g00264 811 Gene3D - 472 751 IPR015943 GO:0005515
Bpe07g00264 811 SMART WD40_4 504 546 IPR001680 GO:0005515
Bpe07g00264 811 SMART WD40_4 553 597 IPR001680 GO:0005515
Bpe07g00264 811 SMART WD40_4 646 684 IPR001680 GO:0005515
Bpe07g00264 811 SMART WD40_4 600 641 IPR001680 GO:0005515
Bpe07g00264 811 PANTHER BNAC09G30780D PROTEIN 2 797 IPR046377 GO:0071493|GO:0080008
Bpe07g00264 811 Gene3D Ribonuclease Inhibitor 334 393 IPR032675 -
Bpe07g00264 811 SUPERFAMILY L domain-like 97 208 - -
Bpe07g00264 811 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 608 643 - -
Bpe07g00264 811 ProSiteProfiles Trp-Asp (WD) repeats profile. 608 643 IPR001680 GO:0005515
Bpe07g00264 811 SUPERFAMILY WD40 repeat-like 473 741 IPR036322 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00264 - - - jre:108996385 1119.76
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00264 Bpe-Chr7:1904044 Bpe02g01914 Bpe-Chr2:21112421 1.52E-07 dispersed
Bpe07g00264 Bpe-Chr7:1904044 Bpe06g00115 Bpe-Chr6:1804140 1.94E-08 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g664 . . Bda06g01214 . Bpe07g00264 . . Bma12g00269 . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1012 Cone10ag1029 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0015699 2 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2 10
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00264 Bpe_Chr07 FPKM 19.721096 22.698713 10.947029 12.065567 5.445912 5.221074 5.805628 8.205277 6.689121 7.477449