Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00332 ATGGAGGCTGGGATTGTCAGAAGTCAACTCAATGGCTCTCGCGTTTGGCGCACCAAGGGCCTCATTGGCGGCAAATGGACTGACGCCTATGATGGGAAGACCATTAAGGTCTACAATCCGGCGACGGGGGAAGTGGTAGCTGATGTCGCGTGTATGGGTAGAAGGGAGGCGGATGATGCTATCGCTTGCGCCGCTGAGGCTTTTAAGACTTGGGGAAAGCTTACAGCACTTGAAAGGAGCAAACGTATGAGGAGATGGTTTGATTTACTGATTGCCCACAAGGAAGAGCTTGGCCAACTCATAACCTTAGAGCAAGGAAAGCCTCTTAAAGACGCCATTGGTGAGGTCGTCTTCGGAGCCAGCTACATTGAGTTTTTCGCAGAGGAAGCTAAACGAGTCTATGGTGATATAATTCCATCTACTTTAAGCGATCGCCGTCTTCTGATCTTAAGACAGCCTGTTGGAGTTGTTGGTGCAATTACACCATGGAACTTTCCTTTCGCTATGATTGCACGGAAGGTTGGTCCTGCTCTTGCATGTGGCTGCACTATTGTCATAAAACCCTCTGAACTTACACCTCTCACGGCCTTAGCTGCTGCTGAGCTCTCCCTTCAAGCTGGAATCCCCCCGGGTGTTGTGAATGTGGTCATGGGAATTGCTCCTGAAATTGGGGAGGCTTTACTTGTCAGCAAAGAGGTAAGAAAGATAACTTTTACGGGCTCAACAGCAGTAGGGAAGATGTTGATGGCTGGTTGTGCCGATACTGTTAAAAAGGTATCTCTGGAGCTTGGTGGCAATGCACCTTGCATTGTGTTTGATGACGCAGACATTGAGGTTGCAATAAAAGGAACTCTTGCTGCAAAGTTTCGAAACACTGGACAAACTTGTGTTTGCGCCAACAGGATCTTTGTTCAAGAAGGCATATACGATAAATTCGCTGCTGCGTTAACGAAAGAAATTCGGAATCTACGAGTAGGAGATGGCTTTGGTGAAGGAGTGGTTCTGGGTCCTCTCATTAATGAAGCTGCAATTCAGAAGGTTGAAACATTTATTCAAGATGCTGTCTCTAAGGGAGCAAAAGTCCTTCTTGGGGGCCGAAGGCATAGGCTTGGAATGACCTTTTATGAGCCGACAGTTATTAAGGATGTGAAGAACGACATGCGGATAGCCAGAGAAGAAGTATTTGGTCCTGTCGCACCTTTATTGCGCTTTAAAACTGAGGAGGAAGTCATCGCCCTTGCCAATGATACTAATGCAGGGTTGGCTGCTTATGTATTCACGACGAATGTCCAACGATCTTGGCGTATGACTGAATCTCTTGAATACGGCATTGTTGGTGTCAATGAAGGACTCATTTCTACAGAGGTAGCTCCATTTGGAGGCTTTAAACAGTCGGGACTTGGTAGGGAAGGTTCGAAATACGGGATGGATGACTTTCTGGAGATGAAATACATGTGCTTGGGGAATCTGTAA 1473 46.91 MEAGIVRSQLNGSRVWRTKGLIGGKWTDAYDGKTIKVYNPATGEVVADVACMGRREADDAIACAAEAFKTWGKLTALERSKRMRRWFDLLIAHKEELGQLITLEQGKPLKDAIGEVVFGASYIEFFAEEAKRVYGDIIPSTLSDRRLLILRQPVGVVGAITPWNFPFAMIARKVGPALACGCTIVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGIAPEIGEALLVSKEVRKITFTGSTAVGKMLMAGCADTVKKVSLELGGNAPCIVFDDADIEVAIKGTLAAKFRNTGQTCVCANRIFVQEGIYDKFAAALTKEIRNLRVGDGFGEGVVLGPLINEAAIQKVETFIQDAVSKGAKVLLGGRRHRLGMTFYEPTVIKDVKNDMRIAREEVFGPVAPLLRFKTEEEVIALANDTNAGLAAYVFTTNVQRSWRMTESLEYGIVGVNEGLISTEVAPFGGFKQSGLGREGSKYGMDDFLEMKYMCLGNL 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2577939 2582797 - Bpe021144.1 Bpe07g00332 106101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00332 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 479 IPR016162 GO:0016491
Bpe07g00332 490 SUPERFAMILY ALDH-like 13 488 IPR016161 GO:0016491
Bpe07g00332 490 CDD ALDH_F5_SSADH_GabD 37 487 - -
Bpe07g00332 490 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 261 268 IPR029510 GO:0016491
Bpe07g00332 490 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 37 483 IPR010102 GO:0009013|GO:0009450
Bpe07g00332 490 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 289 300 IPR016160 GO:0016491
Bpe07g00332 490 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 15 489 - -
Bpe07g00332 490 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 15 489 - -
Bpe07g00332 490 Pfam Aldehyde dehydrogenase family 26 484 IPR015590 GO:0016491
Bpe07g00332 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 265 454 IPR016163 GO:0016620
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00332 Bpe-Chr7:2577939 Bpe12g00589 Bpe-Chr12:11666187 2.14E-116 dispersed
Bpe01g00316 Bpe-Chr1:1962107 Bpe07g00332 Bpe-Chr7:2577939 5.60E-38 transposed
Bpe04g00009 Bpe-Chr4:92788 Bpe07g00332 Bpe-Chr7:2577939 2.05E-40 transposed
Bpe04g01114 Bpe-Chr4:9024778 Bpe07g00332 Bpe-Chr7:2577939 7.30E-70 transposed
Bpe06g00804 Bpe-Chr6:18230099 Bpe07g00332 Bpe-Chr7:2577939 1.74E-54 transposed
Bpe07g00475 Bpe-Chr7:8120640 Bpe07g00332 Bpe-Chr7:2577939 0 transposed
Bpe13g01166 Bpe-Chr13:17091182 Bpe07g00332 Bpe-Chr7:2577939 4.29E-67 transposed
Bpe05g00420 Bpe-Chr5:18586578 Bpe07g00332 Bpe-Chr7:2577939 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00332 K17761 - mnt:21402189 776.163