Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00340 ATGGAGCTAACGAGGCGAGCGATGTCAATAATATTGGTTTCTTCAGCTCTTCTATGGTTGATTCTGTTGTTTGATTTGGTCTCTGCCAACCCTGAAGGTGATGCCTTGAATGCATTGAAGACCAGTTTAGCGGATCCTAATAATGTCCTTCAAAGTTGGGATCCCACACTAGTCAATCCTTGCACATGGTTTCATGTAACATGCAGTCCTGATAATAGTGTCACGAGAGTGGATCTTGGAAATGCAAATCTGTCTGGCCAATTGGTTCCACAGCTTGGTCAACTATCAAATTTGCAGTACTTGGAACTTTATAGCAATAATATTAGTGGAGAAATTCCAGAGCAGCTTGGGAACCTGGGAAACCTGGTGAGCTTGGATCTTTACCTGAACAACTTAACTGGTCCAATACCCAGCACACTGGGCAACCTTCAGAAGCTGCGTTTCTTGCGTCTCAACAACAACAGCTTGTCAGGAACTATTCCAGTATCCTTAACTAATGTTTCCACGCTTCAAGTCTTAGATCTTTCACATAACAAACTAACTGGAGATATTCCCGTCAATGGTTCCTTTTCTATATTCACCCCAATCAGTTTTGCAAATAATCTCTTGAATAATTCTCCACCTTCACCGCCACCTCCAGTTCCTCAATCACCATCAACTTCATCAGGGAATACTGCCACTGGAGCAATTGCTGGAGGAGTTGCTGCCGCTGCTGCCTTGCTTTTTGCTGTCCCTGCAATTGCACTTGCTTTGTGGCGTCGACGAAGACCACACGACCACTTCTTTGATGTACCTGCTGAGGAGGATCCAGAAGTTCATCTTGGCCAGCTCAAAAGGTTTTCTCTGCGGGAACTACAAGTCGCCACTGACTACTTCAGCAATAAACATGTTTTGGGTAGAGGTGGCTTTGGCAAGGTGTACAAAGGCCGTTTGGCCGATGGTACTCTGGTAGCAGTCAAAAGACTTAAAGAGGAGCGTACCCAGGGTGGAGAGCTGCAATTCCAAACTGAAGTGGAGATGATCAGCATGGCTGTGCATCGCAATCTGCTACGGTTACGGGGTTTCTGCATGACACCAACCGAACGGTTGCTTGTTTATCCTTACATGGCTAATGGGAGTGTAGCGTCATGTCTAAGAGAGCGCCTGGAAACACAGCAACCACTTAATTGGTCAATACGCAGACACATTGCTCTTGGTGCTGCTAGGGGTCTTTCTTACTTACATGATCATTGCAATCCGAAGATTATTCACCGAGATGTAAAAGCTGCAAATATTTTATTGGATGAAGAATTTGAAGCTGTTGTAGGGGATTTTGGGCTGGCTAAGCTCATGGACTATAAAGATACTCATGTCACAACTGCAGTGCGTGGTACTATTGGACACATAGCACCAGAATACCTTTCAACTGGAAAATCTTCAGAGAAGACAGATTGTTTCGGATATGGAGTGATGCTTCTTGAGCTCATAACTGGACAGAGAGCTTTTGATCTTGCCCGCCTTGCAAATGATGATGATGTCATGTTACTTGATTGGGTGAAAGGGCTTCTGAAAGACAAGAAGCTGGAGACTCTTGTGGATCCCGACCTTGAAGGAAATTATGTGGATGCAGAGGTGGAGGAGCTCATTCAAGTCGCACTACTTTGCACCCAAAACTCTCCAACAGAGCGTCCAAAAATGTCGGAGGTCGTGAGGATGCTCGAAGGTGATGGCTTGGCTGAAAGATGGGAAGAGTGGGAGAAAGAGGATCGGTTTGTCAACGACTTTAACCGGACTCAAATCCCCCACCCAAGTATGACTTGGAACGTTGTTGACTCGACATCGAACATTCATCCCGATGAATTATCCGGCCCAAGGTGA 1857 45.56 MELTRRAMSIILVSSALLWLILLFDLVSANPEGDALNALKTSLADPNNVLQSWDPTLVNPCTWFHVTCSPDNSVTRVDLGNANLSGQLVPQLGQLSNLQYLELYSNNISGEIPEQLGNLGNLVSLDLYLNNLTGPIPSTLGNLQKLRFLRLNNNSLSGTIPVSLTNVSTLQVLDLSHNKLTGDIPVNGSFSIFTPISFANNLLNNSPPSPPPPVPQSPSTSSGNTATGAIAGGVAAAAALLFAVPAIALALWRRRRPHDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDYFSNKHVLGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERLETQQPLNWSIRRHIALGAARGLSYLHDHCNPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDCFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDPDLEGNYVDAEVEELIQVALLCTQNSPTERPKMSEVVRMLEGDGLAERWEEWEKEDRFVNDFNRTQIPHPSMTWNVVDSTSNIHPDELSGPR 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2671734 2680164 - Bpe021151.1 Bpe07g00340 106109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00340 618 SMART serkin_6 292 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe07g00340 618 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Bpe07g00340 618 Gene3D Ribonuclease Inhibitor 29 209 IPR032675 -
Bpe07g00340 618 Gene3D Transferase(Phosphotransferase) domain 1 369 586 - -
Bpe07g00340 618 Pfam Protein kinase domain 293 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe07g00340 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Bpe07g00340 618 PANTHER BNAA08G11770D PROTEIN 14 618 IPR031048 GO:0004675|GO:0005102|GO:0006468
Bpe07g00340 618 SUPERFAMILY L domain-like 31 209 - -
Bpe07g00340 618 SUPERFAMILY Protein kinase-like (PK-like) 271 567 IPR011009 -
Bpe07g00340 618 MobiDBLite consensus disorder prediction 203 225 - -
Bpe07g00340 618 ProSiteProfiles Protein kinase domain profile. 292 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe07g00340 618 Gene3D Phosphorylase Kinase; domain 1 261 368 - -
Bpe07g00340 618 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Bpe07g00340 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 618 - -
Bpe07g00340 618 ProSiteProfiles Leucine-rich repeat profile. 169 191 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00340 Bpe-Chr7:2671734 Bpe15g00442 Bpe-Chr15:15880815 0 dispersed
Bpe12g00304 Bpe-Chr12:4617860 Bpe07g00340 Bpe-Chr7:2671734 3.79E-62 dispersed
Bpe07g00340 Bpe-Chr7:2671734 Bpe13g00502 Bpe-Chr13:12415241 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63412 PF00069 Pkinase 2.50E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00340 K13416 - csv:101216389 962.6