Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00357 ATGCATCGGAGGAGGGGTCTTCGCGTTCTAATGATTGTGTTTGTCGCTATGATTGCTGAAATGGTGGTGGCAAAGAGTAAGGTTCATATTGTGTACATGGGAGAGAGGCAGCAGCGCCATGACCCGGAGATCGTCAGTCGCTCGCATCATCGGTTGCTGGCCGATTTGCTAGGATGCAACGAGAGGGCCAAGGAATCGTTGATTTACAGTTACAGACATGGATTTTCTGGGTTTGCAGCCAAGCTCACAGAGTCTCAGGCGAGAGAGCTCTCTGAGATGGCTGGAGTTAATTTTGTCATCCCAAATAGCATTTATAAGCTTCAAACAACAAGGAGCTGGGATTTCCTTCAACTCTCTTCTGATTCTCCTTCCAATCTTCTTCAAACCGGCAACTTCGGCAAGGATGTAATTATAGGCGTTCTCGATACTGGAATTTGGCCAGAGTCTCGATCTTTCGCCGACAACGAACAAGGACCGATTCCATCGCAATGGAAAGGTGGGTGTGATTCCGGAGATCAGTTTGACCCCAACACTGACTGCAATAGAAAAATCATTGGCGCCAGATGGTACGTTGACGGGCTCACCGCCGAAATTGGGCAGCCGTTAAACACCTCTGAAAGTGTAGAATTCTTCTCCCCTAGAGACGCCAATGGGCACGGCACCCACGTAGCTAGCACAGCGGCCGGCTCTTTTGTCTCCAACGTCAGCTACAGAGGTCTGGCCGCCGGCATTGCAAGAGGAGGGGCCCCCCTCGCCCGCTTGGCCATCTACAAGGTCTGTTGGAATTTCAAGGGAGGCCGGTGCGGATCCGCTGATATACTCAAGGGTATAGATGAAGCCATTAATGATGGCGTTGATGTGTTGTCTCTTTCGCTCGGTCAACCGGTTCCTCTGCTGTCAGATGTTGATCATCGGAACGCCGTTGCCATCGGTTCCTTCCATGCTGTTGCTAGAGGCATCACCGTTGTCTGTGCCGGTGGAAATGATGGGCCTTCAACTCTTTCCATCTCCAACACGTCGCCTTGGGTCATCACCGTCGCTGCAAGCACGGTCGATCGATCTTTTCCGACCTCCATTATTCTCGGAAACAACGAGACTTTGACGGGTCAAGCTTTGTTTGCTGGCACCGAGGTGGATTTTGCAGGATTGTTCTTCCCGGAGGGTGACGACTTTAACCCCAATGCTAATAGTGTTTGTGAGTCTCTCTCGCTCGATGAGAGTATGGTAGCTGGTAAGGTGGTGCTTTGCTTCACTAAATCCTCTCGTAGTTCAGCTGTTATTTCCGCCCAAGCGGCCGTGAAAGCAGCAGGCGGCGTTGGGGTGATCGCAGCCAAGAATCCGGTCAACGTTGTCACGGCATGCGATCACAGTAGTTTCCCATGCATTCAAGTTGACTACGAGATTGGTACTAGATTACTCTTCTACTTTCGCTCCACCAGTACTCCAAAAGTGAAGTTGAGCACTTCCAGAACCGTAGTGGGCAAGCCTGTCTCAGCCAGTGTCTCCTATTTCTCGTCTCGAGGGCCTAACTCGGTGGCGCCTGAGATTCTGAAACCAGACATAGCAGCACCTGGTGCTAACATACTGGCCGCCGCTTCTCCCCTCAAATGGGGGAGTATCGGCGGCTACTCAATCATCTACGGAACTTCCATGGCTACTCCTCACGTCTCCGGCATCGTGGCGCTTCTCAAATCCGTCCACCCTGGTTGGTCTCCAGCCGCACTTAAATCTGCTCTTGTCACGACAGCGTGGAACCACGACCCATCTGGGTTACCCATTTTCGCCGATGGTGCCACCAGAAAGCCTGCCGATGCATTCGACTACGGAGGTGGAATTGCTAATCCGAACGGAGCTGCCCGCCCTGGTTTGGTCTATGACATGGACACCGCCGACTACCTACGCTACCTCTGTTCTATGGACTACAACAGTAACGGGATATCTGGACTAGCACGCCATCGGAAAACTTGCCCGTCGGAGAAGTCATCTCTTACGGAACTAAACTTTCCTTCCATCACAATCCCAAGGCTCACAAACTCTACCACCGTGAGGAGGACGGTGACAAATGTCGAAAAATCTGAGTCAATCTACAGAGCGACGGTTGAGGCTCCGATGGGAACCACGGTTCAGGTGAGACCTCAGGTTTTGTCCTTCACTCCCGGCGTGGAGAAACTGTCGTTTGAGGTTATTATCTCTACCATACAGACAGTGTACGGAGGTTATACGTTCGGAAGCCTCACTTGGTCCGACGGAGTGCATGTCGTTAGAATTCCCTTGTCCGTCCGAAAAGAGATTCCACCTGGAGCTTATACATAG 2313 51.75 MHRRRGLRVLMIVFVAMIAEMVVAKSKVHIVYMGERQQRHDPEIVSRSHHRLLADLLGCNERAKESLIYSYRHGFSGFAAKLTESQARELSEMAGVNFVIPNSIYKLQTTRSWDFLQLSSDSPSNLLQTGNFGKDVIIGVLDTGIWPESRSFADNEQGPIPSQWKGGCDSGDQFDPNTDCNRKIIGARWYVDGLTAEIGQPLNTSESVEFFSPRDANGHGTHVASTAAGSFVSNVSYRGLAAGIARGGAPLARLAIYKVCWNFKGGRCGSADILKGIDEAINDGVDVLSLSLGQPVPLLSDVDHRNAVAIGSFHAVARGITVVCAGGNDGPSTLSISNTSPWVITVAASTVDRSFPTSIILGNNETLTGQALFAGTEVDFAGLFFPEGDDFNPNANSVCESLSLDESMVAGKVVLCFTKSSRSSAVISAQAAVKAAGGVGVIAAKNPVNVVTACDHSSFPCIQVDYEIGTRLLFYFRSTSTPKVKLSTSRTVVGKPVSASVSYFSSRGPNSVAPEILKPDIAAPGANILAAASPLKWGSIGGYSIIYGTSMATPHVSGIVALLKSVHPGWSPAALKSALVTTAWNHDPSGLPIFADGATRKPADAFDYGGGIANPNGAARPGLVYDMDTADYLRYLCSMDYNSNGISGLARHRKTCPSEKSSLTELNFPSITIPRLTNSTTVRRTVTNVEKSESIYRATVEAPMGTTVQVRPQVLSFTPGVEKLSFEVIISTIQTVYGGYTFGSLTWSDGVHVVRIPLSVRKEIPPGAYT 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2863431 2866525 - Bpe021169.1 Bpe07g00357 106126

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00357 770 Gene3D Peptidase S8/S53 domain 135 632 IPR036852 GO:0004252|GO:0006508
Bpe07g00357 770 CDD Peptidases_S8_3 105 584 IPR034197 -
Bpe07g00357 770 SUPERFAMILY Subtilisin-like 107 623 IPR036852 GO:0004252|GO:0006508
Bpe07g00357 770 Pfam Peptidase inhibitor I9 28 107 IPR010259 -
Bpe07g00357 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 108 IPR037045 -
Bpe07g00357 770 ProSitePatterns Serine proteases, subtilase family, histidine active site. 219 229 IPR022398 -
Bpe07g00357 770 Gene3D - 636 763 - -
Bpe07g00357 770 PANTHER PEPTIDASE S8 16 763 - -
Bpe07g00357 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 16 763 - -
Bpe07g00357 770 CDD PA_subtilisin_like 358 486 - -
Bpe07g00357 770 Pfam Fibronectin type-III domain 665 760 IPR041469 -
Bpe07g00357 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Bpe07g00357 770 Pfam Subtilase family 133 588 IPR000209 GO:0006508|GO:0008236
Bpe07g00357 770 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Bpe07g00357 770 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Bpe07g00357 770 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Bpe07g00357 770 ProSiteProfiles Serine proteases, subtilase domain profile. 112 619 - -
Bpe07g00357 770 Gene3D - 352 493 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00357 - - - qsu:112005666 932.554
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00320 Bpe-Chr5:16817248 Bpe07g00357 Bpe-Chr7:2863431 0 dispersed
Bpe07g00357 Bpe-Chr7:2863431 Bpe08g00325 Bpe-Chr8:1924309 0 dispersed
Bpe02g00239 Bpe-Chr2:1641967 Bpe07g00357 Bpe-Chr7:2863431 2.93E-12 transposed
Bpe14g00412 Bpe-Chr14:3836200 Bpe07g00357 Bpe-Chr7:2863431 2.88E-13 transposed
Bpe05g00393 Bpe-Chr5:18224095 Bpe07g00357 Bpe-Chr7:2863431 1.39E-27 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe09g00335 . 1 769 Subtilisin-like Serine Gene Family AT1G04110 67.3 1.2e-308 1055.4
Bpe02g00336 . 1 704 Subtilisin-like Serine Gene Family AT1G20150 54.0 3.8e-209 724.9
Bpe02g00336 . 1 450 Subtilisin-like Serine Gene Family AT1G20160 58.3 1.1e-141 500.4
Bpe15g01385 . 11 465 Subtilisin-like Serine Gene Family AT1G20160 50.4 4.9e-118 421.8
Bpe11g01032 . 13 834 Subtilisin-like Serine Gene Family AT1G30600 64.1 6.6e-308 1053.1
Bpe07g00357 . 52 769 Subtilisin-like Serine Gene Family AT1G32940 54.5 1.6e-222 769.2
Bpe07g00357 . 52 769 Subtilisin-like Serine Gene Family AT1G32950 53.2 4.6e-217 751.1
Bpe07g00357 . 25 769 Subtilisin-like Serine Gene Family AT1G32960 54.9 3.4e-234 808.1
Bpe11g01011 . 77 861 Subtilisin-like Serine Gene Family AT1G62340 57.9 1.6e-250 862.4
Bpe12g00166 . 2 682 Subtilisin-like Serine Gene Family AT2G04160 66.3 6.2e-268 920.2
Bpe11g00991 . 29 765 Subtilisin-like Serine Gene Family AT2G04160 59.5 3.4e-258 887.9
Bpe03g00743 . 2 711 Subtilisin-like Serine Gene Family AT2G04160 60.5 8.1e-252 866.7
Bpe02g01937 . 27 765 Subtilisin-like Serine Gene Family AT2G04160 56.2 8.1e-244 840.1
Bpe01g00619 . 22 762 Subtilisin-like Serine Gene Family AT2G05920 70.5 1.9e-309 1058.1
Bpe15g00311 . 33 766 Subtilisin-like Serine Gene Family AT2G05920 56.6 1.1e-232 803.1
Bpe13g00117 . 26 761 Subtilisin-like Serine Gene Family AT2G05920 56.6 1.7e-230 795.8
Bpe05g00038 . 26 761 Subtilisin-like Serine Gene Family AT2G05920 54.0 2.3e-219 758.8
Bpe03g00102 . 28 778 Subtilisin-like Serine Gene Family AT2G05920 50.3 4.7e-212 734.6
Bpe14g01337 . 31 768 Subtilisin-like Serine Gene Family AT2G05920 50.3 2.5e-205 712.2
Bpe03g00692 . 23 772 Subtilisin-like Serine Gene Family AT2G05920 51.3 9.8e-202 700.3
Bpe02g01781 . 35 764 Subtilisin-like Serine Gene Family AT2G05920 52.5 3.7e-201 698.4
Bpe10g00715 . 9 572 Subtilisin-like Serine Gene Family AT2G05920 55.0 1.1e-163 573.9
Bpe10g00705 . 1 522 Subtilisin-like Serine Gene Family AT2G05920 55.9 7.1e-160 561.2
Bpe13g01102 . 6 819 Subtilisin-like Serine Gene Family AT2G19170 81.3 0.0e+00 1347.4
Bpe02g02068 . 22 817 Subtilisin-like Serine Gene Family AT2G19170 82.3 0.0e+00 1340.9
Bpe13g00117 . 7 761 Subtilisin-like Serine Gene Family AT3G14067 53.1 6.7e-222 767.3
Bpe15g00311 . 18 766 Subtilisin-like Serine Gene Family AT3G14067 53.3 1.1e-221 766.5
Bpe01g00619 . 3 760 Subtilisin-like Serine Gene Family AT3G14067 52.9 2.6e-218 755.4
Bpe10g00705 . 1 529 Subtilisin-like Serine Gene Family AT3G14067 68.5 4.8e-212 734.6
Bpe05g00038 . 9 761 Subtilisin-like Serine Gene Family AT3G14067 50.8 3.8e-209 724.9
Bpe14g01337 . 27 767 Subtilisin-like Serine Gene Family AT3G14067 50.4 3.3e-200 695.3
Bpe03g00692 . 19 778 Subtilisin-like Serine Gene Family AT3G14067 50.8 1.8e-198 689.5
Bpe10g00715 . 6 578 Subtilisin-like Serine Gene Family AT3G14067 52.9 4.5e-149 525.4
Bpe03g00692 . 28 780 Subtilisin-like Serine Gene Family AT3G14240 74.7 0.0e+00 1154.0
Bpe10g00715 . 1 580 Subtilisin-like Serine Gene Family AT3G14240 79.2 4.9e-273 937.2
Bpe14g01337 . 34 768 Subtilisin-like Serine Gene Family AT3G14240 58.6 4.3e-245 844.3
Bpe13g00117 . 28 757 Subtilisin-like Serine Gene Family AT3G14240 54.2 4.4e-221 764.6
Bpe15g00311 . 35 765 Subtilisin-like Serine Gene Family AT3G14240 53.0 4.5e-218 754.6
Bpe01g00619 . 26 756 Subtilisin-like Serine Gene Family AT3G14240 50.3 1.7e-209 726.1
Bpe02g01781 . 38 760 Subtilisin-like Serine Gene Family AT3G14240 51.3 2.7e-207 718.8
Bpe10g00705 . 1 520 Subtilisin-like Serine Gene Family AT3G14240 51.8 4.6e-146 515.4
Bpe04g01539 . 4 563 Subtilisin-like Serine Gene Family AT4G00230 50.9 7.6e-149 524.2
Bpe02g00758 . 2 288 Subtilisin-like Serine Gene Family AT4G00230 51.4 7.5e-72 268.5
Bpe07g00357 . 52 769 Subtilisin-like Serine Gene Family AT4G10510 53.3 6.5e-219 757.3
Bpe07g00357 . 22 764 Subtilisin-like Serine Gene Family AT4G10520 55.0 1.2e-228 789.6
Bpe07g00357 . 22 764 Subtilisin-like Serine Gene Family AT4G10530 52.9 1.8e-216 749.2
Bpe07g00357 . 24 769 Subtilisin-like Serine Gene Family AT4G10540 53.1 3.9e-230 794.7
Bpe07g00357 . 52 769 Subtilisin-like Serine Gene Family AT4G10550 52.3 6.1e-217 750.7
Bpe11g01032 . 10 834 Subtilisin-like Serine Gene Family AT4G20430 66.9 0.0e+00 1123.2
Bpe02g01926 . 1 285 Subtilisin-like Serine Gene Family AT4G21320 75.2 1.4e-129 459.1
Bpe07g00357 . 26 764 Subtilisin-like Serine Gene Family AT4G21630 51.2 4.9e-201 698.0
Bpe07g00357 . 26 764 Subtilisin-like Serine Gene Family AT4G21650 51.0 1.3e-206 716.5
Bpe08g00325 . 60 765 Subtilisin-like Serine Gene Family AT4G26330 57.4 2.6e-247 851.7
Bpe13g01102 . 6 819 Subtilisin-like Serine Gene Family AT4G30020 80.8 0.0e+00 1344.3
Bpe02g02068 . 5 817 Subtilisin-like Serine Gene Family AT4G30020 80.7 0.0e+00 1341.3
Bpe14g01337 . 22 773 Subtilisin-like Serine Gene Family AT4G34980 73.3 0.0e+00 1136.3
Bpe03g00692 . 21 780 Subtilisin-like Serine Gene Family AT4G34980 54.4 2.5e-229 792.0
Bpe13g00117 . 22 757 Subtilisin-like Serine Gene Family AT4G34980 51.5 2.7e-207 718.8
Bpe15g00311 . 29 765 Subtilisin-like Serine Gene Family AT4G34980 50.6 6.9e-203 704.1
Bpe01g00619 . 24 756 Subtilisin-like Serine Gene Family AT4G34980 50.3 2.6e-202 702.2
Bpe10g00715 . 1 580 Subtilisin-like Serine Gene Family AT4G34980 55.5 3.4e-178 622.1
Bpe10g00705 . 1 523 Subtilisin-like Serine Gene Family AT4G34980 53.5 1.4e-150 530.4
Bpe04g01539 . 21 563 Subtilisin-like Serine Gene Family AT5G03620 59.4 2.8e-188 655.2
Bpe08g01470 . 2 453 Subtilisin-like Serine Gene Family AT5G03620 52.2 2.1e-127 453.0
Bpe02g00758 . 1 279 Subtilisin-like Serine Gene Family AT5G03620 60.5 7.5e-93 338.2
Bpe08g00475 . 268 1018 Subtilisin-like Serine Gene Family AT5G19660 75.0 0.0e+00 1169.1
Bpe11g01032 . 34 610 Subtilisin-like Serine Gene Family AT5G44530 68.9 5.7e-240 827.0
Bpe08g00737 . 1 493 Subtilisin-like Serine Gene Family AT5G45640 51.7 1.4e-136 483.8
Bpe08g00737 . 1 495 Subtilisin-like Serine Gene Family AT5G45650 56.8 3.1e-158 555.8
Bpe03g00102 . 23 782 Subtilisin-like Serine Gene Family AT5G51750 70.0 0.0e+00 1107.4
Bpe15g00311 . 33 766 Subtilisin-like Serine Gene Family AT5G51750 52.7 6.5e-225 777.3
Bpe13g00117 . 17 761 Subtilisin-like Serine Gene Family AT5G51750 52.4 1.5e-224 776.2
Bpe05g00038 . 25 761 Subtilisin-like Serine Gene Family AT5G51750 52.3 2.3e-222 768.8
Bpe10g00715 . 1 580 Subtilisin-like Serine Gene Family AT5G51750 50.3 3.0e-161 565.8
Bpe13g00876 . 626 1185 Subtilisin-like Serine Gene Family AT5G58840 50.3 8.5e-147 517.3
Bpe13g00876 . 625 1352 Subtilisin-like Serine Gene Family AT5G59120 50.1 1.7e-190 662.9
Bpe11g00991 . 14 768 Subtilisin-like Serine Gene Family AT5G59810 68.6 4.7e-308 1053.5
Bpe02g01937 . 15 768 Subtilisin-like Serine Gene Family AT5G59810 64.2 9.6e-285 976.1
Bpe03g00743 . 2 712 Subtilisin-like Serine Gene Family AT5G59810 63.5 1.8e-267 918.7
Bpe12g00166 . 1 682 Subtilisin-like Serine Gene Family AT5G59810 63.3 7.9e-247 850.1
Bpe15g00311 . 32 767 Subtilisin-like Serine Gene Family AT5G67360 72.5 0.0e+00 1091.3
Bpe13g00117 . 7 762 Subtilisin-like Serine Gene Family AT5G67360 70.9 0.0e+00 1084.3
Bpe05g00038 . 10 762 Subtilisin-like Serine Gene Family AT5G67360 66.9 1.7e-294 1008.4
Bpe02g01781 . 17 765 Subtilisin-like Serine Gene Family AT5G67360 61.7 6.7e-267 916.8
Bpe01g00619 . 14 761 Subtilisin-like Serine Gene Family AT5G67360 56.4 1.1e-229 793.1
Bpe03g00102 . 25 778 Subtilisin-like Serine Gene Family AT5G67360 54.6 2.1e-228 788.9
Bpe03g00692 . 20 775 Subtilisin-like Serine Gene Family AT5G67360 50.5 4.6e-207 718.0
Bpe14g01337 . 34 768 Subtilisin-like Serine Gene Family AT5G67360 51.2 8.6e-206 713.8
Bpe10g00715 . 1 575 Subtilisin-like Serine Gene Family AT5G67360 53.6 6.5e-161 564.7
Bpe10g00705 . 1 522 Subtilisin-like Serine Gene Family AT5G67360 54.4 4.2e-152 535.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001239 3 1 3 3 2 1 1 1 1 1 1 1 2 1 1 4 1 1 2 1 1 2 2 5 9 1 5 5 5 6 73
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00357 Bpe_Chr07 FPKM 1.3552 1.495152 1.80189 1.6178 3.405028 3.51038 3.695882 2.740056 3.00158 2.798462