Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00403 ATGGCAAGGTTTCTGAGTAACATTCTGATTGCTGAGACTCCACTTACACTTGATGAGAGGGGAAATAGCGTAGAGTACTCCTTTGCATTGGAGTATCCAGGTCCCGCGATCAATTTCTCAATTCCACGAGCAATGCCTGTTGACATTGAGGAAATACCAACTGCATCCTTAGTCGTTTCAGCTTCTCACTTCAATAGTTTATTATTACCAATTGTACAACCAATCAGGAAAAAATCCGTGGGGGGGACAAAAATGAGTGCTAAATCGGTTGTTTCTTCAAGTTCTGTGACTCCGAAAGCTGACTCAGATTGCCCAGATTCCTCTAAGATAGAAATCAATTACTGGAATGTCTCTTCTGAACCTGATGATTACTGTCTGGCCAGGTTGTTTGATGAATTTGAAAGCTCTCATTCACTGGAACTTTGTGACGAATCGAAGGAAAAATTAGAGAGTGAGATAGACTTAGCTGAAGACGAAAACGATGAAAGTTCCGAAAGTGATATGATTTCTCCCGATTGGGGATCACCAGATTCCATGTTAAGTTCTTCATCCGAGATTGTTTTGTTCAAAGAAGAAGAGCATGAGAACAAAAAGCAATCGGCCGTTACTTTTTGTGATCCTGAATCAAACGAAATAATGAGCGAAGGATCCAGTCAATATGAGACGCAAAGTATCCAAGTTAGGCCAAAGGCTCAAAGAAAGGGGAAAAAGGGATCGTGTTATCGATGTCTGACAGGAAACCAGTTGACAGAGAAGGAAATGTGTATTGTTTGTGGAGCAAAGTATTGTCGTAAGTGTGTGTTAAGAGAAATGGGGTCAATGCCTGAAGGGAGAAAATGTGTGAGTTGCATCGGCTTTCATATCGATGAATCGAGACGAGAAAGCTTGGGAAAGTGCTCGAGATTGCTTAAAAAGATGCTTTCTAATTTGGAGATCGAAATTATTATGAGGGCCGAGATGGAGAGTCTGGTGAATCAGCTACCACCCAAGCTTGTTTGGGTGAATGATATCCCTTTAAGTAAAGAGGAACTTTGTATTTTACTAAGTTGCTCAAATCCACCAAAAAAACTCAAACCAGGATTATTTTGGTATGACAAAGTATCTGGTTTTTGGGGACAGAAAGGAAAGCAGCCGTGTCAGATTATCAGCCCACACTTAAATGTTGGGGGTCATATCAAGAAAGATGCTAGCAATGGAAACACGAATGTCTTTATGAACAATAGGGAGATCACTATGAAGGAGCTCTATATGCTCAAGAAGCTATATTTCTGCAATGGCGATTTGAATGTAATCATGGTACCTACCTGTGGTAAAACTAAGCTGGTTTGTGCTGTATTATCTTTGCCATTGCCGCATAATCCAACGAATTCCGGAGCGGAAGAAGTGAAAATAGTTGCTCCCAATTTAATCAATAAATCAACCCTTTATAGGCTTCTCCTTGTTGGGTATAATAAATCTGGCACCAGTACTTTTTTTAAGCAGCTTAGGTGTAGAAGCAACATATACACGGCTTTTCCATTATTGCATGTCATCTATTTCCCATTGTTAGTTCAAGCTAAGAGTCTTTACAACATTCCTTTCTCCAAAGATGAGCGCCAACATATTAAGGCCATGATTCAAAGAAATTTGTATGGATATATTGGAATATTGCTTGAGGGCCGTCAGCGATTTGAAGAAGAGGTGTCTAATAAGAGGAAAGTGCCAAGATTCAATCAGTTGGATCCTTCAGAATTAGCTGCAAGGAACATTGATGAGAGAACAACTTACGTGATTGGCCCAAGACTGAAAGCTTTTTCAGATTGGCTCTTAAAGGTCATGGTGAGTGGAAATTTGGAGGCTATATTTCCCGCTGCTACTCGAGAATACGCTCCATTTATTGAGGATTTATGGAGAGATCCTGCCTTTCAAGCTACATACATCCGAAGAAATGAATTAGAACTTCTACCCAGAATAGCTACTTATTTTCTTGATCGGGCTGTGGAAATTTCAAAGATCGATTATGAGCCGTCCGAGATTGACATTTTATATGCCGAAGGAATTTCAGCTTCTAATGGTCTGAGTGACGTCAAATTTTCATTCCCAGAATCACCACAGGATTTTGTTCTTGATCAACTATACGAGCATGATCCTTCTCAAAGATACCAGCTCATTAGAGTTCATCCCAGTAGCCTCGGAGAGAATTGCAAATGGCCGGAAATGTTTGAAAATGTCGATATTGTTCTATTTTGCGTCGCCTTGACAGATTACAACGAGTTTCATGATGATCAATTTGGAAATTCTATTAACAAGATGATAGCGAGTAAGAAACTCTTCGAAAGCATCATTCAAAGTCCGACCATGAAGAAGAAACACTTTCTTCTCATACTTAACAAGTTTGATTTGTTCGAGGAAAAAATCAAACAAGTTCCGCTCTCTCAATGTGAATGGTTCGACGACTTCAATCCCTTGATCAGCTCCCATTTTAAAGTCAGCGGATCAAATGGCACGAATACTTCGCTGGCTCATCAAGCTTTTCAATACATTGCAGTGAAGTTTAAGAGACTCTTCTGCTCTTACACAAATAACAAGCTTTTTGTTTCGTTGAGTACTGGAATGGAGCCTGATTCTGTAAATGAAACTCTGAGATATGCAAGGGAGATCCTTAAATGGCGGAATGAGGAGTCCGCCTTTGGTTCCGAGTTGTCATCTATGAGCATTGAGGTCAGCACTACGTCCTAA 2718 40.18 MARFLSNILIAETPLTLDERGNSVEYSFALEYPGPAINFSIPRAMPVDIEEIPTASLVVSASHFNSLLLPIVQPIRKKSVGGTKMSAKSVVSSSSVTPKADSDCPDSSKIEINYWNVSSEPDDYCLARLFDEFESSHSLELCDESKEKLESEIDLAEDENDESSESDMISPDWGSPDSMLSSSSEIVLFKEEEHENKKQSAVTFCDPESNEIMSEGSSQYETQSIQVRPKAQRKGKKGSCYRCLTGNQLTEKEMCIVCGAKYCRKCVLREMGSMPEGRKCVSCIGFHIDESRRESLGKCSRLLKKMLSNLEIEIIMRAEMESLVNQLPPKLVWVNDIPLSKEELCILLSCSNPPKKLKPGLFWYDKVSGFWGQKGKQPCQIISPHLNVGGHIKKDASNGNTNVFMNNREITMKELYMLKKLYFCNGDLNVIMVPTCGKTKLVCAVLSLPLPHNPTNSGAEEVKIVAPNLINKSTLYRLLLVGYNKSGTSTFFKQLRCRSNIYTAFPLLHVIYFPLLVQAKSLYNIPFSKDERQHIKAMIQRNLYGYIGILLEGRQRFEEEVSNKRKVPRFNQLDPSELAARNIDERTTYVIGPRLKAFSDWLLKVMVSGNLEAIFPAATREYAPFIEDLWRDPAFQATYIRRNELELLPRIATYFLDRAVEISKIDYEPSEIDILYAEGISASNGLSDVKFSFPESPQDFVLDQLYEHDPSQRYQLIRVHPSSLGENCKWPEMFENVDIVLFCVALTDYNEFHDDQFGNSINKMIASKKLFESIIQSPTMKKKHFLLILNKFDLFEEKIKQVPLSQCEWFDDFNPLISSHFKVSGSNGTNTSLAHQAFQYIAVKFKRLFCSYTNNKLFVSLSTGMEPDSVNETLRYAREILKWRNEESAFGSELSSMSIEVSTTS 905
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3848109 3856722 - Bpe021223.3 Bpe07g00403 106172

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00403 905 MobiDBLite consensus disorder prediction 148 176 - -
Bpe07g00403 905 Gene3D - 529 674 IPR011025 GO:0007165
Bpe07g00403 905 SMART galpha_1 464 865 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bpe07g00403 905 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 518 903 - -
Bpe07g00403 905 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 17 497 - -
Bpe07g00403 905 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 518 903 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bpe07g00403 905 ProSiteProfiles G-alpha domain profile. 474 900 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bpe07g00403 905 Coils Coil 139 166 - -
Bpe07g00403 905 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 17 497 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bpe07g00403 905 Pfam G-protein alpha subunit 471 880 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bpe07g00403 905 PRINTS Alpha G protein (transducin) signature 477 492 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bpe07g00403 905 PRINTS Alpha G protein (transducin) signature 737 765 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bpe07g00403 905 PRINTS Alpha G protein (transducin) signature 785 794 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bpe07g00403 905 SUPERFAMILY Transducin (alpha subunit), insertion domain 527 677 IPR011025 GO:0007165
Bpe07g00403 905 Gene3D - 675 889 IPR027417 -
Bpe07g00403 905 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 473 886 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00403 - - - mcha:111017232 922.539
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00403 Bpe-Chr7:3848109 Bpe14g00955 Bpe-Chr14:7081961 1.21E-07 dispersed
Bpe06g00234 Bpe-Chr6:12483384 Bpe07g00403 Bpe-Chr7:3848109 0 transposed
Bpe07g00239 Bpe-Chr7:1694809 Bpe07g00403 Bpe-Chr7:3848109 0 transposed
Bpe07g01085 Bpe-Chr7:16203304 Bpe07g00403 Bpe-Chr7:3848109 0 transposed
Bpe05g00354 Bpe-Chr5:17504482 Bpe07g00403 Bpe-Chr7:3848109 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g526 . Blo15g00719 . . Bpe07g00403 . . Bma12g00482 . . Cma02g00427 Cma20g00879 Car02g00284 Car20g00758 . . . . . . . . . . . . . . . . . Cone12ag1124 Cone8ag1168 . . Lsi10g00329 . Chy11g00419 . . . . . . . . . Sed05g3643 Cmo02g00428 Cmo20g00886 . . . . . Cpe05g01234 Bhi10g02061 Tan05g1365 Cmetu11g1444 . Hepe08g1048 . . Cla09g01736 Cam09g1830 Cec09g1890 Cco09g1983 . . Cre01g0680 . Csa02g01217 . Cme11g00480
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004689 1 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 4 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00403 Bpe_Chr07 FPKM 31.925121 35.543854 38.69519 37.488667 13.909238 15.193093 14.11653 20.396523 20.534195 21.04048