Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe07g00427 | ATGGACACAGCACTGCCGGGAATGTTGCACTGTTTCACTGCCAATGGGAGTTCTACGGACATGGCTGCCCTGCAGAGACATATGGCTCGCCGGAAATGGCAAGAAGAACAGAGGAAAGAGTCGGATCAGAACCTGAACTCCTATGGCGGTTTCCGTTTGAATGAGTTTAGTAGCTTGTTTTCTTCTCCGATCCAGGTGAGTAAGGTCCAAAGCTTTCAGGGTTTGATGGGCGGAAATGAGTCCGCGCTTGGAGAGGTAGTGGTCGGCTCGTTGAAGCCTGACCCAGGTTTTGATGTTGTCTGGCCGGAGTTGGAGATGCCGAGTATGGAATCCGGGTCGTCTGGGTTGGTTAAAGGAACGACTGAGCTTGAGGGGCACTACTCTGTTTCTAGAGCTTCCAGCTCTACACCTGCAATGGCAGCTCCGGCCCCCGGGGAGACCAAACTTCAAGAATCAACGGAGAAGATGAACTCAGCCGCCGCTGGAGGGGATAGCTTCAAGAGGAGGAGAGCTGAAAAGATGCAAGACACCATGGTGAAAGACAGCAAAGAGAAGAAGATCAAAGTAAGCATAGAAGAAACAGAATCAAAGATGACAGACCAAAACAGCACTAAAACGGACAACCACGGAGAAACCTCAGCCGACACAGCCAAAGAAAACAACTCAAAAGCTTCCGACTTTCAAAAGCCAGATTACATCCACGTTCGAGCACGTCGCGGCCAGGCGACAGACAGCCATAGCTTAGCCGAAAGAGTGAGGAGAGAGAAGATTAGTGAGAGAATGAGATATTTGCAGGATTTAGTCCCAGGATGCAACAAAATCACAGGCAAAGCTGGAATGCTAGACGAAATCATCAACTACGTTCAATCGCTTCAATGCCAAGTAGAGTTTCTATCGATGAAATTAGCCACCTTAAACCCGAGGCTAGAACCCATAGTTGATGGAATCTTCGCAAAAGAGACTTTTCCTTCTTGCACGTCAAATTTTCCAAATGTGGAAATTTCATCAGAAGCCAACAATTCAGCTTACACCCACCAGTTTAATCCATTACAGCAAATGCTTTCTTCATCTGGTTTGGAAATGGAAAGAAGCCCCCCGGATATCATTCGTCGAACCATTAGCACACCCGTTTCGTTCATCCCGGAAACATTTGTTAGCTCATACTGCTTCACACAAAACCAGCCTCCTTCAGCATTTGAAGCTGATTTACAAAATTTTTACAACGTCTCGTTTGATAAAGGAAGATCAACAGATTTTTCATCTCACTCGTATACAGGTAGATAA | 1284 | 46.65 | MDTALPGMLHCFTANGSSTDMAALQRHMARRKWQEEQRKESDQNLNSYGGFRLNEFSSLFSSPIQVSKVQSFQGLMGGNESALGEVVVGSLKPDPGFDVVWPELEMPSMESGSSGLVKGTTELEGHYSVSRASSSTPAMAAPAPGETKLQESTEKMNSAAAGGDSFKRRRAEKMQDTMVKDSKEKKIKVSIEETESKMTDQNSTKTDNHGETSADTAKENNSKASDFQKPDYIHVRARRGQATDSHSLAERVRREKISERMRYLQDLVPGCNKITGKAGMLDEIINYVQSLQCQVEFLSMKLATLNPRLEPIVDGIFAKETFPSCTSNFPNVEISSEANNSAYTHQFNPLQQMLSSSGLEMERSPPDIIRRTISTPVSFIPETFVSSYCFTQNQPPSAFEADLQNFYNVSFDKGRSTDFSSHSYTGR | 427 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4811294 | 4812829 | - | Bpe021251.1 | Bpe07g00427 | 106196 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe07g00427 | 427 | CDD | bHLH_AtBPE_like | 231 | 316 | - | - | |
| Bpe07g00427 | 427 | MobiDBLite | consensus disorder prediction | 129 | 229 | - | - | |
| Bpe07g00427 | 427 | SMART | finulus | 247 | 297 | IPR011598 | GO:0046983 | |
| Bpe07g00427 | 427 | Pfam | Helix-loop-helix DNA-binding domain | 245 | 292 | IPR011598 | GO:0046983 | |
| Bpe07g00427 | 427 | MobiDBLite | consensus disorder prediction | 165 | 204 | - | - | |
| Bpe07g00427 | 427 | PANTHER | TRANSCRIPTION FACTOR BHLH63-LIKE | 20 | 414 | - | - | |
| Bpe07g00427 | 427 | MobiDBLite | consensus disorder prediction | 211 | 229 | - | - | |
| Bpe07g00427 | 427 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 20 | 414 | IPR024097 | GO:0006355 | |
| Bpe07g00427 | 427 | Gene3D | - | 238 | 312 | IPR036638 | GO:0046983 | |
| Bpe07g00427 | 427 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 241 | 291 | IPR011598 | GO:0046983 | |
| Bpe07g00427 | 427 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 239 | 310 | IPR036638 | GO:0046983 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe07g00427 | Bpe-Chr7:4811294 | Bpe15g00864 | Bpe-Chr15:18608878 | 3.45E-135 | dispersed | |
| Bpe07g00427 | Bpe-Chr7:4811294 | Bpe05g00337 | Bpe-Chr5:17247750 | 0 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 21623 | PF00010 | HLH | 6.60E-06 | No_clan | Bpe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe07g00427 | - | - | jre:109013802 | 409.453 |