Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00449 ATGAAGATCCGATGCGATGTTTGTGGCAAACGCGAAGCCTCCGTCTTTTGCTCCGCCGACGAAGCCGCTCTCTGCGACGGCTGTGACAGCCATGTCCACCATGCGAACAAGCTCGCCGGACTACACACCCGTTTCTCTCTCCTCAATCCCACCTTCAAAGAGTCACCTCTCTGCGACATCTGCCAGGAGAGGCGAGCTTTCCTTTTCTGTCAGGAAGATCGGGCAATCCTCTGTAGAGAATGCGACGTTCCAATTCACAGAGCAAACGAACATACCCAGAAACATAATAGATTTCTTCTTACAGGCGTCAAGCTTTCTTCAACTTCTTCGTTCTCCCCAACTTGTTCTTCGTCCAGTGGGTGTGAAGCATCCATTGACACCGAAAGTAGAAGGTCGAGAACACGGACAAAGAGATCATCAAATACAGCTTACAATGGAGTATCTTCTTGTCCGTCTGAAATATCTCAGCCGGAAGGCATTGATTCAGGAACCTTCTCAGCAAGTAGTATATCAGAGTACTTAGAGACGTTGCCTGGATGGGGTATAGAAGATTTTCTTGATCCATCATTTTCCTCCCATGGCTTCCGTAAAGTTTTAGGTAGACCCAACATGGAATGA 618 47.9 MKIRCDVCGKREASVFCSADEAALCDGCDSHVHHANKLAGLHTRFSLLNPTFKESPLCDICQERRAFLFCQEDRAILCRECDVPIHRANEHTQKHNRFLLTGVKLSSTSSFSPTCSSSSGCEASIDTESRRSRTRTKRSSNTAYNGVSSCPSEISQPEGIDSGTFSASSISEYLETLPGWGIEDFLDPSFSSHGFRKVLGRPNME 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6308688 6309394 - Bpe021277.1 Bpe07g00449 106218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00449 205 Gene3D Classic Zinc Finger 1 99 - -
Bpe07g00449 205 MobiDBLite consensus disorder prediction 108 125 - -
Bpe07g00449 205 Pfam B-box zinc finger 54 92 IPR000315 GO:0008270
Bpe07g00449 205 Pfam B-box zinc finger 3 43 IPR000315 GO:0008270
Bpe07g00449 205 CDD Bbox1_BBX-like 57 100 - -
Bpe07g00449 205 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Bpe07g00449 205 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 197 - -
Bpe07g00449 205 MobiDBLite consensus disorder prediction 138 158 - -
Bpe07g00449 205 CDD Bbox1_BBX-like 5 47 - -
Bpe07g00449 205 SMART bboxneu5 53 100 IPR000315 GO:0008270
Bpe07g00449 205 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bpe07g00449 205 MobiDBLite consensus disorder prediction 108 158 - -
Bpe07g00449 205 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 197 - -
Bpe07g00449 205 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00365 Bpe-Chr2:2405816 Bpe07g00449 Bpe-Chr7:6308688 4.48E-58 dispersed
Bpe05g00126 Bpe-Chr5:2779190 Bpe07g00449 Bpe-Chr7:6308688 2.03E-58 dispersed
Bpe07g00449 Bpe-Chr7:6308688 Bpe15g00849 Bpe-Chr15:18497243 1.17E-83 dispersed
Bpe07g00449 Bpe-Chr7:6308688 Bpe05g00323 Bpe-Chr5:16885232 1.02E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21625 PF00643 zf-B_box 1.10E-07 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00449 - - mnt:21391799 261.151