Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00462 ATGGCTAGTTTTCTTCCTGGTGATTCAACGCTTCATGGAATGTATGAAGGTGGTTCTTCTTCTCAGGACAAGTCTGAAGATGGTGCTCGATGGTACTTTTCCCGGAAGGAAATTGAAGAAAGTTCGCCATCTAAACAGGATGGGATTGATTTGAAAAAGGAGAGTTATCTACGCAAGTCATATTGTACCTATTTGCAAGATCTGGGAATGAGGCTGAAAGTACCTCAAGTAACAATTGCTACGGCTATAATTTTCTGCCACCGGTTTTTTCTTCGACAATCCCTTGCAAAGAACGATAGAAGGACCATTGCAACCATATGCATGTTTCTTGCTGGGAAAGTAGAAGAAACTCCGCGTCCGCTGAAAGATGTTATCCTTGTTTCATATGAGATTATACATAAAAAGGATGCAGCTGCAGTTCAAAAGATCAAGCAAAAGATTGTATTTGTTCCTTTATTTACCATCTCACTTCATTATGATCTTTGTTTACCATCTCACTTTCATGTGTATTTATTTAGTACAAACAGACGTAAGTTTCTTGTTTTCCTTCCGTGTATGAATCTTATGCAGGAGGTGTATGAACAGCAAAAAGAACTAATTTTACTTGGAGAGAGACTTGTTCTTGCAACTCTTGGTTTTGATCTTAATGTGCACCATCCCTACAAACCCCTCGTTGAGGCAATAAAAAAATTCAAAGTTGCTCAAAATGCCCTTGCACAAGTAGCATGGAATTTTGTTAATGATGGATTGAGGACATCTCTTTGCTTGCAATTTAAACCCCACCACATTGCTGCTGGTGCCATTTTCCTTGCTGCTAAGTTCCTTAAAGTAAAGCTCCCTTCAGATGGGGAGAAAGTGTGGTGGCAAGAGTTTGATGTCACCCCACGTCAGTTGGAGGAAGTTAGCAACCAGATGTTGGAACTATACGAACAGAATCGAGTGCCACCTTCGAGTGAAGTTGATGGAAGCGCAATTGATGGATCTACTAATCGGATCTCTACTAAAGTTCCTACTAGCAGTGAAGAACACATGCCAACACAAAATCATTCACAGGCTGGAGGTACTTGCTCCAGATCTGCAACTTCTAAGCCTGGATCGTCAAGGCCGGCATCTGAACAATCATGTAAAGATCTTCATAGCGAGCCTCAGCGACCCAACCGGAGTCAAAGTAGTGAAAATGGGAGCATGGAGATGAAACATTATGTGAATCTCAAAGAAGATGGTGACTATAAACTAAATCCATATCATGAATCAGAGCCGCCCTTGCCTTCTCAGGACAGCATCGGTAAAGTTCAGAATTTGTCGAAGTTTCGGTTGGAGAGATTGGACGAACAAAATCAAGATGGCAGTTTGAGAACTAATGAAGCAAGAGAAGTAGTGGACTTGAAGGATAAACATGCGAGCAGAGGAGTAGAGGATAAAGATGGTGCAATGCGGTGGTCACCTCGAGAGGTAATAAAAAAGATTGATAAGGACAAGGTAAAGGCGGCATTGGAGAAACGGAGGAAGTCCCTTGGTGGTGTCAATCGGAAAACAGAATCAATGGACGAAGATGATCTTATCGAGAGGGAGCTTGAAGCTGGCATCGAACTGGCTGCTGAAAGTGCGAAAAATAAGCGAGAGGTAAGGCAAGGTTGGGCTAAGACGTCGAATAGGCCAGAATATGAGGATATGCGTCAAGAAAGTGATAGAGATGACCGTCGACAAGGAGTGATAGGACAATCAAATTATGGGCCTGATTTAAATAACATGGAAGAAGGGGAGTTATCAATTACTAATGATCCTGGCCTAGAATATCAGTCCCCAAAGTCGGGAAGCCGCAAACGAAAGACCGGGAGCCCACCCGGCAAAGTGTTTGAGGGGAAGCAGTGGCAAGATTCATTGGCTGCATCTCACCGAGATAAGCACTCTGATTATATGGGAGATGGAAACAGTGTAGGTCGGGTTCGTCACGTTGACAGGGACCACAAGCGGCATGTTCAAGAAAATCATGTATGA 1998 42.94 MASFLPGDSTLHGMYEGGSSSQDKSEDGARWYFSRKEIEESSPSKQDGIDLKKESYLRKSYCTYLQDLGMRLKVPQVTIATAIIFCHRFFLRQSLAKNDRRTIATICMFLAGKVEETPRPLKDVILVSYEIIHKKDAAAVQKIKQKIVFVPLFTISLHYDLCLPSHFHVYLFSTNRRKFLVFLPCMNLMQEVYEQQKELILLGERLVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSSEVDGSAIDGSTNRISTKVPTSSEEHMPTQNHSQAGGTCSRSATSKPGSSRPASEQSCKDLHSEPQRPNRSQSSENGSMEMKHYVNLKEDGDYKLNPYHESEPPLPSQDSIGKVQNLSKFRLERLDEQNQDGSLRTNEAREVVDLKDKHASRGVEDKDGAMRWSPREVIKKIDKDKVKAALEKRRKSLGGVNRKTESMDEDDLIERELEAGIELAAESAKNKREVRQGWAKTSNRPEYEDMRQESDRDDRRQGVIGQSNYGPDLNNMEEGELSITNDPGLEYQSPKSGSRKRKTGSPPGKVFEGKQWQDSLAASHRDKHSDYMGDGNSVGRVRHVDRDHKRHVQENHV 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7090849 7099137 - Bpe021297.2 Bpe07g00462 106231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00462 665 PANTHER CYCLIN 190 570 IPR043198 GO:0006357|GO:0016538
Bpe07g00462 665 PANTHER CYCLIN 2 149 IPR043198 GO:0006357|GO:0016538
Bpe07g00462 665 MobiDBLite consensus disorder prediction 627 665 - -
Bpe07g00462 665 Pfam Cyclin, N-terminal domain 32 136 IPR006671 -
Bpe07g00462 665 Gene3D - 217 320 - -
Bpe07g00462 665 PANTHER - 2 149 - -
Bpe07g00462 665 Gene3D - 18 215 - -
Bpe07g00462 665 MobiDBLite consensus disorder prediction 1 28 - -
Bpe07g00462 665 MobiDBLite consensus disorder prediction 310 373 - -
Bpe07g00462 665 SUPERFAMILY Cyclin-like 218 314 IPR036915 -
Bpe07g00462 665 MobiDBLite consensus disorder prediction 575 600 - -
Bpe07g00462 665 MobiDBLite consensus disorder prediction 533 665 - -
Bpe07g00462 665 CDD CYCLIN 216 277 IPR013763 -
Bpe07g00462 665 MobiDBLite consensus disorder prediction 409 428 - -
Bpe07g00462 665 MobiDBLite consensus disorder prediction 310 396 - -
Bpe07g00462 665 SUPERFAMILY Cyclin-like 27 217 IPR036915 -
Bpe07g00462 665 SMART cyclin_7 222 307 IPR013763 -
Bpe07g00462 665 SMART cyclin_7 63 145 IPR013763 -
Bpe07g00462 665 CDD CYCLIN 57 128 IPR013763 -
Bpe07g00462 665 PANTHER - 190 570 - -
Bpe07g00462 665 MobiDBLite consensus disorder prediction 533 570 - -
Bpe07g00462 665 PIRSF Cyclin_L 29 514 - -
Bpe07g00462 665 PIRSF Cyclin_L 427 664 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00467 Bpe-Chr1:2874835 Bpe07g00462 Bpe-Chr7:7090849 3.65E-121 dispersed
Bpe04g00840 Bpe-Chr4:5529134 Bpe07g00462 Bpe-Chr7:7090849 1.96E-57 dispersed
Bpe07g00462 Bpe-Chr7:7090849 Bpe09g00610 Bpe-Chr9:14823462 2.30E-34 dispersed
Bpe07g00462 Bpe-Chr7:7090849 Bpe08g00421 Bpe-Chr8:2590675 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00462 K15188 - vvi:100265067 772.311