Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00471 ATGGCTTCCGCAACTTCGACCACGAGACTCTCTTTCCTCCCCACCACCACATCATCGTCAACCTCCACAACTCGCTCTTCCCTTCACCAAGTCTCACCCACATCGTATTCGTCGTCCATTCGCCTCCGCACCTATTGCATTCAGCGCCTCGGTTTCACCGCCGTCGACCCACTGTTCTCTCTCCATGTTGCTTCAAAGGTCCGATTGTTTAGAGGTAAAGCTTCAAGGGCCGTGGCATCCATGGCCAAGAAGAGCGTCGGTGATTTGACTGCTGCTGACTTGAAAGGTAAGAGGGTGTTTGTGAGGGCAGACTTGAATGTTCCTTTAGATGACGCCCAGAATATTACCGACGATACTAGGATCAGGGCTGCCATTCCCACCATCAAGCATCTCATTCAAAATGGAGCTAAAGTTCTTCTTTCCAGCCATTTGGGAAGACCTAAAGGTGTTACTCGCAAATACAGTTTGGCACCTCTTGTTCCTAGACTCTCTGAACTGCTCGGCATTCAGGTTGTGATGGCCACAGACTGTATTGGTGAAGAGGTTGAAAAGTCGGTGACTGCACTTCCTGAAGGTGGTGTTCTTCTGCTCGAAAATGTCCGATTTTACAAGGAAGAAGAGAAGAATGACCCCGAATTTGCGAAAAAGCTTGCATCCATTGCAGATCTCTATGTAAACGATGCATTTGGTACTGCCCATAGAGCTCATGCTTCAACTGAAGGTGTCACGAAATTCCTTAAGCCATCTGTAGCTGGTTTTCTCTTACAAAAGGAACTTGATTACCTTGTTGGGGCAGTATCCAGCCCAAAAAGGCCATTTGCAGCCATTGTGGGTGGTTCAAAGGTCTCATCAAAGATCGGTGTGATCGAGTCGCTTCTGGAGAAGTGTGACATACTACTTCTTGGTGGGGGAATGATCTTTACATTTTACAAGGCACAAGGTCTCCCTGTGGGCGCATCTTTGGTAGAGGAGGATAAGCTAGATCTTGCCACATCCCTCCTTGCAAAGGCTAAGGCCAAAGGAGTGTCTCTTCTGTTACCAACTGATGTTGTCATTGCCGACAAGTTTGCTCCAGATGCAAACAGCAAGATTGTCCCAGCAAGTGCAATCCCCGACGGCTGGATGGGATTGGATATTGGACCGGATTCCATCAAGACATTCAACGATGCTTTGGAAACAACAAAAACCGTAATCTGGAATGGACCAATGGGAGTGTTTGAGTTCGACAAGTTTGCAGTTGGAACAGAGGCTGTCGCTAAGAAACTAGCTGAACTGAGTGGGAAGGGAGTAACCACTATTATAGGAGGCGGAGATTCAGTGGCAGCCGTGGAGAAGGTAGGAGTTGCAGGCCTGATGAGCCACATCTCGACTGGTGGTGGTGCAAGCTTGGAATTGTTGGAAGGCAAAGAGCTTCCTGGCGTACTTGCTCTCGACGAAGCAACCCCAGTGGCTGTGTGA 1458 48.7 MASATSTTRLSFLPTTTSSSTSTTRSSLHQVSPTSYSSSIRLRTYCIQRLGFTAVDPLFSLHVASKVRLFRGKASRAVASMAKKSVGDLTAADLKGKRVFVRADLNVPLDDAQNITDDTRIRAAIPTIKHLIQNGAKVLLSSHLGRPKGVTRKYSLAPLVPRLSELLGIQVVMATDCIGEEVEKSVTALPEGGVLLLENVRFYKEEEKNDPEFAKKLASIADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLPVGASLVEEDKLDLATSLLAKAKAKGVSLLLPTDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSIKTFNDALETTKTVIWNGPMGVFEFDKFAVGTEAVAKKLAELSGKGVTTIIGGGDSVAAVEKVGVAGLMSHISTGGGASLELLEGKELPGVLALDEATPVAV 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7570316 7940822 - Bpe021310.1 Bpe07g00471 106240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00471 485 Hamap Phosphoglycerate kinase [pgk]. 88 479 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 CDD Phosphoglycerate_kinase 89 479 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 Gene3D - 266 479 IPR015824 GO:0004618|GO:0006096
Bpe07g00471 485 PANTHER PHOSPHOGLYCERATE KINASE 1 480 - -
Bpe07g00471 485 PANTHER PHOSPHOGLYCERATE KINASE 1 480 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 Gene3D - 87 263 IPR015824 GO:0004618|GO:0006096
Bpe07g00471 485 MobiDBLite consensus disorder prediction 1 31 - -
Bpe07g00471 485 Pfam Phosphoglycerate kinase 91 469 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 SUPERFAMILY Phosphoglycerate kinase 88 479 IPR036043 GO:0004618|GO:0006096
Bpe07g00471 485 ProSitePatterns Phosphoglycerate kinase signature. 98 108 IPR015911 GO:0004618|GO:0006096
Bpe07g00471 485 PRINTS Phosphoglycerate kinase family signature 93 109 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 PRINTS Phosphoglycerate kinase family signature 455 472 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 PRINTS Phosphoglycerate kinase family signature 115 137 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 PRINTS Phosphoglycerate kinase family signature 192 207 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 PRINTS Phosphoglycerate kinase family signature 432 443 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 PRINTS Phosphoglycerate kinase family signature 220 242 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 PRINTS Phosphoglycerate kinase family signature 274 293 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 PRINTS Phosphoglycerate kinase family signature 251 273 IPR001576 GO:0004618|GO:0006096
Bpe07g00471 485 PRINTS Phosphoglycerate kinase family signature 396 421 IPR001576 GO:0004618|GO:0006096
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01281 Bpe-Chr3:31338628 Bpe07g00471 Bpe-Chr7:7570316 3.20E-44 dispersed
Bpe07g00471 Bpe-Chr7:7570316 Bpe12g00036 Bpe-Chr12:303974 1.14E-32 dispersed
Bpe07g00471 Bpe-Chr7:7570316 Bpe15g00916 Bpe-Chr15:18968521 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00471 K00927 - csv:101215670 790.415