Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00475 ATGATTTCAGCAGCAGTGGCAGCTCGTATGGCCTTTGGATCGACCAGACTTCTCCTCTCTCGCCCATCATATTCGCTTTACACGCATTCTTCCTCTCCTCTCATCTCACGACAGATACACATGGAGGCTGAGAGAATCAGGACTCAACTGAATGGTTCAGGTATTTGGCGGACCCAAGGCCTCATTGCCGGCGAATGGACTGATGCCTATGATGGGAAAACCATTAAGGTTTACAATCCAGCAACGGGCGAGGCTATAGCAGATGTCCCATGTATGGGTGCAAAGGAGACAAATGATGCTATCTCCTCAGCCTATGATGCTTTTAAGTCTTGGAGCAAGATTACTGCTACTGAAAGGAGCAAACGCCTCAGAAAATGGTATGATCTATTGATTGCACACAAAGAAGAGCTTGGACAACTTATAACCTTAGAGCAAGGGAAACCTCTTAAAGAAGCCATTGGCGAGGTTGGCTATGGAGCCAGCTTCATCGAATTCTATGCAGAAGAAGCTAAACGGGTGTATGGTGATATAATTCCATCCACTTTGGATGATCGCCGACTTTTAGTCATGAAGCAGCCGGTTGGGGTTGTTGGTGCGATTACCCCTTGGAACTTTCCTTTGGCAATGATCACTCGAAAGGTTGGTCCTGCTCTTGCTTGTGGCTGTACTGTTGTTATAAAACCATCTGAACTGACACCACTCACAGCTTTAGCAGCTGCTGAGCTTTCTCTCCAGGCAGGAATTCCCCATGGTGCTGTGAATGTGGTGTTGGGAAATGCTTCAGAAATCGGGGGTGCTTTACTTGCCAGCAAACAGGTAAGAAAGATAACATTCACAGGCTCAACAGCTGTGGGAAAGAAGCTGATGGCTGGTGCTGCAGAGACTGTTAAAAAGGTGTCTTTGGAACTCGGTGGTAATGCACCTTGTATTATCTTTGATGATGCAGACATTGAGGTTGCAGTCAAAGGAACTCTAGCTGCAAAGTTCCGGAATAGTGGGCAAACTTGTGTTTGTGCCAACAGGGTTCTTGTTCAAGAAGGTATATATGAGAAATTTGCGACTGCCTTTTCCAAAGCAGTCCAGAATCTGCAAGTTGGAGATGGCTTCAGTGAAGGTGTGGCTCAGGGTCCTCTCATTAACGACGCAGCAGTGCAAAAGGTTGAATCATTTATTCAAGATGCTGTCTCTAAAGGTGCAAAAGTTCTTCTGGGGGGTCAAAGGCATAGGCTCGGGATGACATTTTATGAGCCTACAGTTCTTACAAGTGTCAAAAATGATATGCTGGTAGCGAGAGAGGAAGTATTTGGTCCTGTGGCGCCTCTTTTGCTGTTCAAAACTGAGGATGAAGCAATTTCCCTTGCAAATGACACCAATGCAGGGTTAGCTGCCTATATATTTACAAACAATGTCCAACGAACTTGGCGTGTTGCTGAATCTCTTGAATACGGTCTTGTTGGCGTTAATGAAGGATTGATTTCTACAGAGGTAGCTCCGTTTGGAGGTGTTAAACAGTCGGGGCTTGGTCGGGAAGGTTCCAAATACGGCATGGATGATTATTTGGAGATGAAGTATGTGTGCTTTGGGAATATGAAGAGTGGGGAATGA 1605 45.79 MISAAVAARMAFGSTRLLLSRPSYSLYTHSSSPLISRQIHMEAERIRTQLNGSGIWRTQGLIAGEWTDAYDGKTIKVYNPATGEAIADVPCMGAKETNDAISSAYDAFKSWSKITATERSKRLRKWYDLLIAHKEELGQLITLEQGKPLKEAIGEVGYGASFIEFYAEEAKRVYGDIIPSTLDDRRLLVMKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSLQAGIPHGAVNVVLGNASEIGGALLASKQVRKITFTGSTAVGKKLMAGAAETVKKVSLELGGNAPCIIFDDADIEVAVKGTLAAKFRNSGQTCVCANRVLVQEGIYEKFATAFSKAVQNLQVGDGFSEGVAQGPLINDAAVQKVESFIQDAVSKGAKVLLGGQRHRLGMTFYEPTVLTSVKNDMLVAREEVFGPVAPLLLFKTEDEAISLANDTNAGLAAYIFTNNVQRTWRVAESLEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDDYLEMKYVCFGNMKSGE 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8120640 8128947 - Bpe021313.1 Bpe07g00475 106244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00475 534 CDD ALDH_F5_SSADH_GabD 77 527 - -
Bpe07g00475 534 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Bpe07g00475 534 PIRSF ALDH 85 533 IPR012394 GO:0006081
Bpe07g00475 534 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 77 523 IPR010102 GO:0009013|GO:0009450
Bpe07g00475 534 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 55 530 - -
Bpe07g00475 534 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 55 530 - -
Bpe07g00475 534 Pfam Aldehyde dehydrogenase family 66 525 IPR015590 GO:0016491
Bpe07g00475 534 SUPERFAMILY ALDH-like 54 529 IPR016161 GO:0016491
Bpe07g00475 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 519 IPR016162 GO:0016491
Bpe07g00475 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620
Bpe07g00475 534 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01114 Bpe-Chr4:9024778 Bpe07g00475 Bpe-Chr7:8120640 3.87E-67 dispersed
Bpe05g00420 Bpe-Chr5:18586578 Bpe07g00475 Bpe-Chr7:8120640 0 dispersed
Bpe06g00804 Bpe-Chr6:18230099 Bpe07g00475 Bpe-Chr7:8120640 1.21E-54 dispersed
Bpe07g00475 Bpe-Chr7:8120640 Bpe12g00589 Bpe-Chr12:11666187 5.46E-117 dispersed
Bpe12g00721 Bpe-Chr12:12741865 Bpe07g00475 Bpe-Chr7:8120640 7.26E-58 dispersed
Bpe13g00428 Bpe-Chr13:11886052 Bpe07g00475 Bpe-Chr7:8120640 6.28E-34 dispersed
Bpe13g01166 Bpe-Chr13:17091182 Bpe07g00475 Bpe-Chr7:8120640 1.81E-66 dispersed
Bpe07g00475 Bpe-Chr7:8120640 Bpe07g00332 Bpe-Chr7:2577939 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00475 K17761 - twl:119988855 843.188