Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00477 ATGTTCCAGCAGGTCAAGAAGGCCTCCCCTATGAATTCCCATGAGAGACCCATCTGCCTTCAAGGAGACTCTGGTCTGGTCCTCACCACTGACCCCAAGCCCCGTCTGCGGTGGACTTCCGAGCTCCACGAGCGCTTTGTTGATGCCGTCACTCAGCTTGGCGGCCCAGATAAGGCCACTCCAAAGACAATCATGAGGGTCATGGGTGTGAAGGGTCTTACTCTTTACCACCTCAAGAGCCACCTTCAGAAATACAGGCTTGGAAAGCAACCGCATAAGGAATTCAACGATCACTCAATCAAGGATGGAATGAGAGCTTCGGCATTAGATCTTCAACGAAACATTTCATCTTCTTCCAGCATGATGGAACGCAGCATGAATGATAACTCACACACGGTTGATGCAATTAGGACGCAAATGGAGGTGCAGAGAAGATTACAGGAGCAGCTAGAGGTTCAGAAACACCTTCAGCTGAGGATTGAAGCGCAAGGGAAGTACATGCAAAGCATACTGGAGAAGGCTTGTCAAACCCTCGCCGGGGAAAACAGTACGAGTAATGCAGCTGTGCCGTTCAAGACAGCCAAAAATAACAATGCTAGTCCAAGTCCAGATCATGCTATTCCCCCTTTTAAGTTCGCATGCTTTGGAGACGCTGGTAATATCAGCGGCGGCGATAGTGGTGGCGACCAAATTGACCATCTTCGTCAGAACATGGAAAAATGCAACAACGAGAGTGGTTTCATGTCGAGCAGTGGCAACTACTTGTGCTCGGAGAAGAAGAAGCCTGGCTCTTATGGAAAGAGCCCATTCATCTGGTGTGATGATATCCGACTGCAAGATAGCACTTTCAATTCAGATTGCTGCACCAACATCATCCGTTGA 882 48.98 MFQQVKKASPMNSHERPICLQGDSGLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKYRLGKQPHKEFNDHSIKDGMRASALDLQRNISSSSSMMERSMNDNSHTVDAIRTQMEVQRRLQEQLEVQKHLQLRIEAQGKYMQSILEKACQTLAGENSTSNAAVPFKTAKNNNASPSPDHAIPPFKFACFGDAGNISGGDSGGDQIDHLRQNMEKCNNESGFMSSSGNYLCSEKKKPGSYGKSPFIWCDDIRLQDSTFNSDCCTNIIR 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8171923 8173316 + Bpe021315.2 Bpe07g00477 106246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00477 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 90 IPR017930 -
Bpe07g00477 293 SUPERFAMILY Homeodomain-like 32 88 IPR009057 -
Bpe07g00477 293 Gene3D - 32 90 - -
Bpe07g00477 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 281 IPR044848 GO:0003700
Bpe07g00477 293 Pfam MYB-CC type transfactor, LHEQLE motif 134 177 IPR025756 -
Bpe07g00477 293 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 33 88 IPR006447 GO:0003677
Bpe07g00477 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 1 281 - -
Bpe07g00477 293 Pfam Myb-like DNA-binding domain 36 86 IPR001005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00477 Bpe15g00926 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00053 Bpe-Chr1:345035 Bpe07g00477 Bpe-Chr7:8171923 1.03E-51 dispersed
Bpe07g00477 Bpe-Chr7:8171923 Bpe12g00030 Bpe-Chr12:272030 7.55E-88 dispersed
Bpe07g00477 Bpe-Chr7:8171923 Bpe15g00926 Bpe-Chr15:19025279 9.69E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21627 PF00249 Myb_DNA-binding 1.20E-07 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00477 - - cpap:110817235 365.155