Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00491 CAGGTATGGAGAGCATCTTTAGGAGAACTAGTCGGCACTGCAGTGTTCGTCTTCTCCCTCGATGCCATAGTCATCTCTTCTTACCACAGCAAATCCAGCTCGCCGAATCTGATAATGTCTTGCCTCATTGCGATCACCGTCGCGATTCTTCTCCTAGCCACCAATCCCATCTCCGGCGGCCATCTAAACCCAGCTATCACCTTAGGCGCTGCGTTTCTCGGTATCGTCTCCCTCTCAAGGGCACTCATTTACATTGTGGCCCAGTGCATTGGAGCCATAATCGGAGCTCTAGCCCTGAAAGCTGTAGTAAACAGCGCCATTGAAGAGAACTTCTCGCTGGGAGGATGCACTCTCATTGTGATTATACCAGGGCCTAATGGGCCCCTCACAATGGGCCTAGAAAAGAGCCAGGCCCTTTGGCTTGAAATCATCTGCACTTTCGTGCTTCTTTTTGCATCAATTTGGATAGCTTTTGACCATCGGCAGGCGAAGGCGTTAGGTCGGATCATTGTGTTTCTTATAATTGGCATCGTGGTTGGCCTCCTGGTGTTTGTGTCCACGACACTCACTGACACTAAAGGGTATGCTGGGGCCGGAATGAATCCGGCTCGATGTCTGGGGCCCGCCATTGTTCGTGGGGGCAACCTCTGGAATGGCCATTGGATTTTCTGGGCTGGCCCCGCTATTGCTTGCTTGGTCTTCTGCATCTACGTCAAAATGATTCCACGACAGCATTACCAGGATCAAGGGTACAAGCATGATATCTTTGACATGTTTAAAACTTCATTCAAGTGCAGCCCTGGTGATAGGAAATAA 816 50.25 QVWRASLGELVGTAVFVFSLDAIVISSYHSKSSSPNLIMSCLIAITVAILLLATNPISGGHLNPAITLGAAFLGIVSLSRALIYIVAQCIGAIIGALALKAVVNSAIEENFSLGGCTLIVIIPGPNGPLTMGLEKSQALWLEIICTFVLLFASIWIAFDHRQAKALGRIIVFLIIGIVVGLLVFVSTTLTDTKGYAGAGMNPARCLGPAIVRGGNLWNGHWIFWAGPAIACLVFCIYVKMIPRQHYQDQGYKHDIFDMFKTSFKCSPGDRK 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9366058 9366873 + Bpe021333.1 Bpe07g00491 106260

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00491 271 Gene3D Glycerol uptake facilitator protein. 1 255 IPR023271 -
Bpe07g00491 271 Pfam Major intrinsic protein 2 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe07g00491 271 PANTHER AQUAPORIN-LIKE 1 263 - -
Bpe07g00491 271 SUPERFAMILY Aquaporin-like 2 243 IPR023271 -
Bpe07g00491 271 ProSitePatterns MIP family signature. 61 69 IPR022357 -
Bpe07g00491 271 PANTHER AQUAPORIN-LIKE 1 263 - -
Bpe07g00491 271 PRINTS Major intrinsic protein family signature 4 23 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe07g00491 271 PRINTS Major intrinsic protein family signature 221 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe07g00491 271 PRINTS Major intrinsic protein family signature 80 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe07g00491 271 PRINTS Major intrinsic protein family signature 182 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe07g00491 271 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe07g00491 271 PRINTS Major intrinsic protein family signature 43 67 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00491 - - K09866 qsu:112008441 375.941
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00491 Bpe-Chr7:9366058 Bpe08g00157 Bpe-Chr8:844091 1.51E-25 dispersed
Bpe07g00491 Bpe-Chr7:9366058 Bpe15g00808 Bpe-Chr15:18257018 4.64E-25 transposed
Bpe07g00491 Bpe-Chr7:9366058 Bpe02g00794 Bpe-Chr2:5774315 3.02E-26 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g90 . . . . Bpe07g00491 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo20g00773 . . . . Cpe16g00292 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010832 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 1 1 1 1 1 1 1 1 2 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00491 Bpe_Chr07 FPKM 1.401426 1.184435 2.116628 1.6709 4.120486 4.633968 3.602286 3.058933 2.489204 2.020831