Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00494 ATGTCTTCCGGCTTCAGCGGCGATGAAACTGCTCCCTTTTTCGGCTTCCTTGGCGCCGCTGCCGCTCTTGTCTTCTCATGTATGGGAGCTGCTTATGGTACCGCAAAGAGTGGTGTTGGTGTGGCTTCAATGGGGGTAATGAGGCCCGAGCTGGTTATGAAATCTATTGTTCCAGTAGTTATGGCTGGAGTTTTGGGAATATATGGTTTGATTATTGCTGTGATTATCAGCACTGGGATCAATCCCAAGGCCAAATCGTATTACCTATTTGATGGTTATGCTCATTTGTCATCTGGACTTGCTTGTGGCCTTGCTGGGCTGTCAGCAGGAATGGCAATTGGTATTGTTGGCGATGCTGGTGTCCGAGCCAACGCACAACAGCCGAAACTTTTTGTTGGGATGATTTTGATTCTCATCTTTGCTGAGGCGCTGGCACTCTATGGCCTCATTGTTGGCATCATCTTATCTTCACGAGCTGGCCAGTCCAGAGCAGAGTAG 498 48.8 MSSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9605676 9607871 - Bpe021338.1 Bpe07g00494 106263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00494 165 SUPERFAMILY F1F0 ATP synthase subunit C 13 77 IPR035921 -
Bpe07g00494 165 SUPERFAMILY F1F0 ATP synthase subunit C 87 156 IPR035921 -
Bpe07g00494 165 PRINTS Vacuolar ATP synthase 16kDa subunit signature 30 54 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bpe07g00494 165 PRINTS Vacuolar ATP synthase 16kDa subunit signature 56 80 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bpe07g00494 165 PRINTS Vacuolar ATP synthase 16kDa subunit signature 107 133 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bpe07g00494 165 PRINTS Vacuolar ATP synthase 16kDa subunit signature 134 157 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bpe07g00494 165 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 165 - -
Bpe07g00494 165 CDD ATP-synt_Vo_c_ATP6C_rpt2 89 156 - -
Bpe07g00494 165 CDD ATP-synt_Vo_c_ATP6C_rpt1 13 80 - -
Bpe07g00494 165 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 165 - -
Bpe07g00494 165 Gene3D - 11 162 IPR035921 -
Bpe07g00494 165 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 13 121 IPR011555 GO:0033179|GO:0046961|GO:1902600
Bpe07g00494 165 Pfam ATP synthase subunit C 97 155 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bpe07g00494 165 Pfam ATP synthase subunit C 17 76 IPR002379 GO:0015078|GO:0033177|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00364 Bpe-Chr2:2386718 Bpe07g00494 Bpe-Chr7:9605676 1.95E-08 dispersed
Bpe05g00130 Bpe-Chr5:2941980 Bpe07g00494 Bpe-Chr7:9605676 1.26E-111 dispersed
Bpe05g00312 Bpe-Chr5:16688258 Bpe07g00494 Bpe-Chr7:9605676 3.31E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00494 K02155 - rcu:8277999 288.885