Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00505 ATGCAGGTGAAGTTCACGGTCGAGAAGCTTCAACATATCATGGATTTCAAGCATAACATTCGCAATATGTCTGTTATTGCACATGTTGATCATGGAAAGTCAACACTAACCGACTCTCTAGTGGCTGCCGCTGGTATAATTGCACAAGAAGCTGCTGGCGATGTTAGGATTATGGATACACGGAAGGATGAGGCTGAACGTGGTATAACCATCAAATCCACTGGTATCTCTCTCTACTACGAGATGGAAGAGCAGACCTTGAAGAATTACATAGGAGAGAGACAGGGAAATGAATATCTCATCAATCTCATTGATTCTCCTGGCCATGTTGATTTCTCATCGGAGGTTACAGCTGCTCTGCGTATTACCGATGGTGCACTTGTGGTGGTGGACTGTGTGGAGGGGGTATGTGTGCAGACCGAAACGGTATTACGACAGGCTTTAGGAGAGAGGATTAGGCCAATTCTCACTCTTAACAAGATGGATAGGTGCTTCTTGGAACTTCAGATTGACGGGGAGGAAGCTTATCGGCTATTCCAAAAGGTTATCGAAAATACTAATGTGATTATGGCAACATATGAGGATCCCCTCCTTGGTGATGTTCAGGTCTACCCTGAGAAAGGGACAGTTTCCTTCTCTGCTGGTTTGCATGGTTGGGCTTTCACTCTTACAAACTTTGCAAAGATGTATGCCTCTAAATTTGGGGTTGATGAGGCAAAAATGATGGAGCGTCTTTGGGGAGAGAATTTCTTCGACCCTTCAACGAAAAAATGGACTAGCAAAAATACTGGTTCTCCTACTTGCAAGCGTGGCTTTGTTCAACTCTGCTACGAACCTATCAATCGGATTATTTCAATTTGTTTGATGGAGCAGAAGGATGAGTTGTGGCCATTGTTGCAAAAGCTTGGAGTAGTTATCAAGGCTGAAGAGAGAGATCTAAGAGGGAAGGCGTTGATGAAGCGAGTCATGCAGACATGGCTGCCAGCAAGCAATGCCCTATTGGAAATGATGATCTTTCATCTACCTTCACCTGCGAAAGCTCAAAAGTACCGTGTCGAGAACTTGTACGAGGGACCTATGGACGACATTTATGCTAATGCGATTAGAAATTGTGACCCTGATGGCCCTCTTATGCTTTACGTGTCTAAAATGATTCCAGCCTCAGATAAAGGACGATTTTTTGCTTTCGGCCGAGTCTTCTCCGGTAAAGTCTCAACTGGAATGAAGGTTAGAATCATGGGTCCGAATTATGTCCCTGGGAATTGGCCAAAAAAGGACTTTTACGTGAAGAGTGTGCAGAAAACTGTGATTTAG 1314 44.22 MQVKFTVEKLQHIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEAAGDVRIMDTRKDEAERGITIKSTGISLYYEMEEQTLKNYIGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPILTLNKMDRCFLELQIDGEEAYRLFQKVIENTNVIMATYEDPLLGDVQVYPEKGTVSFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMERLWGENFFDPSTKKWTSKNTGSPTCKRGFVQLCYEPINRIISICLMEQKDELWPLLQKLGVVIKAEERDLRGKALMKRVMQTWLPASNALLEMMIFHLPSPAKAQKYRVENLYEGPMDDIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGMKVRIMGPNYVPGNWPKKDFYVKSVQKTVI 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10179566 10181242 + Bpe021350.2 Bpe07g00505 106274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00505 437 Pfam Elongation factor Tu GTP binding domain 18 343 IPR000795 GO:0003924|GO:0005525
Bpe07g00505 437 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 3 437 - -
Bpe07g00505 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 342 IPR027417 -
Bpe07g00505 437 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 18 345 IPR000795 GO:0003924|GO:0005525
Bpe07g00505 437 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 3 437 - -
Bpe07g00505 437 CDD EF2 21 231 - -
Bpe07g00505 437 PRINTS GTP-binding elongation factor signature 118 129 IPR000795 GO:0003924|GO:0005525
Bpe07g00505 437 PRINTS GTP-binding elongation factor signature 22 35 IPR000795 GO:0003924|GO:0005525
Bpe07g00505 437 PRINTS GTP-binding elongation factor signature 66 74 IPR000795 GO:0003924|GO:0005525
Bpe07g00505 437 PRINTS GTP-binding elongation factor signature 102 112 IPR000795 GO:0003924|GO:0005525
Bpe07g00505 437 PRINTS GTP-binding elongation factor signature 154 163 IPR000795 GO:0003924|GO:0005525
Bpe07g00505 437 TIGRFAM small_GTP: small GTP-binding protein domain 20 169 IPR005225 GO:0005525
Bpe07g00505 437 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 59 74 IPR031157 -
Bpe07g00505 437 Gene3D - 4 238 IPR027417 -
Bpe07g00505 437 SUPERFAMILY Translation proteins 343 436 IPR009000 -
Bpe07g00505 437 Gene3D Translation factors 344 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00505 Bpe-Chr7:10179566 Bpe12g00290 Bpe-Chr12:3625686 0 dispersed
Bpe07g00505 Bpe-Chr7:10179566 Bpe02g02156 Bpe-Chr2:22840038 1.81E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00505 K03234 - tcc:18594569 787.719