Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00556 ATGCCGCTCCCCTCCAGACATGGTTTTTGCTTCGAGCTATTTGGGTTTTTGTTTTGTTTAATGGTGTTGATGCTCAAATGCTCTGTTGCTTCAGCTCAGCTCCGACAAGCCATCTCCGATCCGCATTGGAAATCTGCGACTGCCACCTGGTACGGCAGCCCTGACGGCGATGGCAGCGACGGTGGCGCTTGTGGGTATGGAAATTTGGTGGACGTTAAGCCATTAAAGGCTAGAGTGGGAGCAGTAAGCCCTGTGTTGTTTAAAAATGGCGTAGGGTGTGGCGCATGCTACAAGGTCAGGTGCTTAGATAGAAGCATTTGCGCGAGACGAGCTGTTACTATAATTGTCACCGACGAGTGCCCCGGCGGTTACTGCGCGAATGGAAATACCCACTTCGATCTCAGCGGCGCAGCGTTTGGTCGTTTGGCCGTCGCAGGTGAAGATAGTCAGCTCAGGAACCGAGGCGAAATCTCTGTCATCTATCGACGGACTCCATGTAAATATCCTGGAAAGAACATCGCCTTTCATGTTAATGAAGGTTCAACTGAATATTGGCTTTCACTCTTGGTGGAGTTCGAGGATGGAGATGGAGATATTGGATCAATGCAAATAAAAGAAGCAAATTCATGTGAGTGGCTGGCAATGAAACATATATGGGGAGCCACATGGTGCGTTGTCGGGGGGCCATTTAGAGGTCCTTTTTCGGTGAAGTTAACAACGTTATTAACAGGAAGAACTCTGTCTGCCAGAGATGTAATTCCAAAGAACTGGGCTCCTAAAGCCACTTATTCCTCCCGCCTTAATTTCTCTTAG 813 48.71 MPLPSRHGFCFELFGFLFCLMVLMLKCSVASAQLRQAISDPHWKSATATWYGSPDGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFKNGVGCGACYKVRCLDRSICARRAVTIIVTDECPGGYCANGNTHFDLSGAAFGRLAVAGEDSQLRNRGEISVIYRRTPCKYPGKNIAFHVNEGSTEYWLSLLVEFEDGDGDIGSMQIKEANSCEWLAMKHIWGATWCVVGGPFRGPFSVKLTTLLTGRTLSARDVIPKNWAPKATYSSRLNFS 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12068382 12069768 + Bpe021402.1 Bpe07g00556 106325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00556 270 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 61 171 IPR007112 -
Bpe07g00556 270 SMART dpbb_1 79 161 IPR007112 -
Bpe07g00556 270 PANTHER EXPANSIN-B17 31 269 - -
Bpe07g00556 270 SUPERFAMILY Barwin-like endoglucanases 36 170 IPR036908 -
Bpe07g00556 270 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 184 265 IPR007117 -
Bpe07g00556 270 Pfam Expansin C-terminal domain 173 254 IPR007117 -
Bpe07g00556 270 SUPERFAMILY PHL pollen allergen 171 265 IPR036749 -
Bpe07g00556 270 Pfam Lytic transglycolase 81 159 IPR009009 -
Bpe07g00556 270 PRINTS Major pollen allergen Lol pI signature 175 190 IPR005795 GO:0005576|GO:0019953
Bpe07g00556 270 PRINTS Major pollen allergen Lol pI signature 241 258 IPR005795 GO:0005576|GO:0019953
Bpe07g00556 270 PRINTS Major pollen allergen Lol pI signature 121 136 IPR005795 GO:0005576|GO:0019953
Bpe07g00556 270 PRINTS Major pollen allergen Lol pI signature 191 206 IPR005795 GO:0005576|GO:0019953
Bpe07g00556 270 PRINTS Major pollen allergen Lol pI signature 81 92 IPR005795 GO:0005576|GO:0019953
Bpe07g00556 270 PRINTS Major pollen allergen Lol pI signature 143 158 IPR005795 GO:0005576|GO:0019953
Bpe07g00556 270 Gene3D - 26 166 IPR036908 -
Bpe07g00556 270 Gene3D - 167 266 IPR036749 -
Bpe07g00556 270 PANTHER EXPANSIN-B3 31 269 - -
Bpe07g00556 270 PRINTS Expansin/Lol pI family signature 60 78 IPR007118 GO:0005576
Bpe07g00556 270 PRINTS Expansin/Lol pI family signature 83 101 IPR007118 GO:0005576
Bpe07g00556 270 PRINTS Expansin/Lol pI family signature 42 57 IPR007118 GO:0005576
Bpe07g00556 270 PRINTS Expansin/Lol pI family signature 154 170 IPR007118 GO:0005576
Bpe07g00556 270 PRINTS Expansin/Lol pI family signature 212 226 IPR007118 GO:0005576
Bpe07g00556 270 PRINTS Expansin/Lol pI family signature 251 265 IPR007118 GO:0005576
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00556 Bpe12g00248 CCT
Bpe07g00556 Bpe15g00684 CCT
Bpe07g00556 Bpe14g00659 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00556 Bpe-Chr7:12068382 Bpe15g00684 Bpe-Chr15:17500524 5.13E-146 dispersed
Bpe12g00248 Bpe-Chr12:2317539 Bpe07g00556 Bpe-Chr7:12068382 5.28E-141 wgd
Bpe14g00659 Bpe-Chr14:5299134 Bpe07g00556 Bpe-Chr7:12068382 2.98E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00556 K20628 - cit:102618203 433.721