Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00561 ATGTCGAGCCGGATCGTCACCAATGGAAAGACTCCGACTGCTTGCATTTTCACCCAACAGGGTCGCAAGGGAATTAACCAGGATGCCATGATTGTGTGGGAAGAGTTCATGTCTGGAGATGTAACGTTTTGTGGTGTTTTCGATGGTCATGGGCCACACGGCCATCTAGTTGCTCGGAAAGTTAGAGATGCTTTACCAAAAAAGCTTCTATCGTTCTTGCTTTCTTCTCAATTGAAGCAGAACCGATCTGGTCAAAACTGTTTCAACAGGAAGTCCAAGAATGAAGAAGATGGAGATGCAGAGACGGATGCTTCAGCAGAAGATAAATCGGATTCTGCATGGAGGGAAGCATTCCTCGGGTCATACAAAGCCATGGATAAGGAGCTAAGATCCCATCCAAATCTGGACTGTTTCTGCAGTGGCAGTACTGCCGTGACTATAATCAAACAGGGCTCAAATCTGTTCATGGGAAATATCGGGGATTCTCGAGCGATTCTTGGATCGCGGGGAAGTGACGATTCCATGGTGGCAATCCAATTGACTGTTGATCTGAAGCCTGATTTGCCCAGAGAAGCTGAAAGGATAAAACAATGCAAAGGTAGAGTCTTTGCATTGCAGGATGAGCCTGAAGTGCCAAGAGTCTGGCTGCCATTTGACGATGCACCTGGGCTAGCAATGGCTCGAGCTTTTGGCGATTTCTGTTTGAAGGAATATGGTGTGATCTCTATACCAGAATTCTCCCATCGAATACTCACAAATAAAGATCAGTTCATCGTTCTCGCCTCAGATGGGGTATGGGATGTGTTGAGTAATGAGGAGGTGGTGAGGATTGTGTCTACGGCTTCCACGAGGTCGTCAGCTGCGAGAGTCCTGGTCGACAAAGCCGCCCAAGAATGGAAGCTCAAATACCCAACTTCGAAGATGGACGATTGTGCAGTCGTTTGCCTATTTCTGGATGGAAAAATGGACTCTGAATCGGATTACGACGAACAAGGTTCTTCATCTGTAATTCTTCAAAGAGATCATTCTGGCAACGGTATGATCGAATCAGACGGTACCCAGAAGAGTGAGCCAACTTTGCGGAGAAACGGCACTGTCCGGTCATCTGGAGAAGAAGAAACTTCCGAGAAATTGCCCGTGGAAGCGACAGAAAGAGTTGCAGCAGAAGATCAGAACTGGTCAGGTTTGGAAGGGGTGACGAGAGTGAACTCACTAGTCCAGCTACCTAGATTTTCTCAAGAAAGGCTAAAGCCTTGA 1257 47.1 MSSRIVTNGKTPTACIFTQQGRKGINQDAMIVWEEFMSGDVTFCGVFDGHGPHGHLVARKVRDALPKKLLSFLLSSQLKQNRSGQNCFNRKSKNEEDGDAETDASAEDKSDSAWREAFLGSYKAMDKELRSHPNLDCFCSGSTAVTIIKQGSNLFMGNIGDSRAILGSRGSDDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRILTNKDQFIVLASDGVWDVLSNEEVVRIVSTASTRSSAARVLVDKAAQEWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGSSSVILQRDHSGNGMIESDGTQKSEPTLRRNGTVRSSGEEETSEKLPVEATERVAAEDQNWSGLEGVTRVNSLVQLPRFSQERLKP 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12157814 12159401 + Bpe021408.1 Bpe07g00561 106330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00561 418 MobiDBLite consensus disorder prediction 340 365 - -
Bpe07g00561 418 SMART PP2C_4 2 316 IPR001932 -
Bpe07g00561 418 SUPERFAMILY PP2C-like 12 320 IPR036457 -
Bpe07g00561 418 MobiDBLite consensus disorder prediction 89 109 - -
Bpe07g00561 418 PANTHER ALPHABET, ISOFORM E-RELATED 7 406 - -
Bpe07g00561 418 CDD PP2Cc 14 318 IPR001932 -
Bpe07g00561 418 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 7 406 - -
Bpe07g00561 418 MobiDBLite consensus disorder prediction 366 383 - -
Bpe07g00561 418 Gene3D - 4 320 IPR036457 -
Bpe07g00561 418 MobiDBLite consensus disorder prediction 340 383 - -
Bpe07g00561 418 ProSiteProfiles PPM-type phosphatase domain profile. 13 318 IPR001932 -
Bpe07g00561 418 Pfam Protein phosphatase 2C 99 296 IPR001932 -
Bpe07g00561 418 MobiDBLite consensus disorder prediction 84 109 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00561 Bpe-Chr7:12157814 Bpe09g00681 Bpe-Chr9:15406769 3.30E-151 dispersed
Bpe12g00241 Bpe-Chr12:2155219 Bpe07g00561 Bpe-Chr7:12157814 0 wgd
Bpe14g00665 Bpe-Chr14:5324064 Bpe07g00561 Bpe-Chr7:12157814 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00561 - - rcu:8262108 649.818